Algoriphagus sp. NBT04N3: GYM62_19915
Help
Entry
GYM62_19915 CDS
T09623
Name
(GenBank) DeoR/GlpR transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
algo
Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
algo03000
]
GYM62_19915
Transcription factors [BR:
algo03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
GYM62_19915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
MarR
HTH_20
GntR
Put_DNA-bind_N
Fe_dep_repress
MarR_2
TrmB
HTH_PafC
RepL
HTH_5
LexA_DNA_bind
DUF1670
EAP30
HTH_24
HTH_Crp_2
DUF7342
Rrf2
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QYH40956
LinkDB
All DBs
Position
4589682..4590443
Genome browser
AA seq
253 aa
AA seq
DB search
MTQAERHRFILEELDKAGFVTVSDLAKAMDVTMVTVRKDLKVLEDKGLLYRSHGSATSVS
PYVSDRSVQVKKLEQVEEKSKIAEKALAYIEDQEAIIIGSGTTVVALAQAIPRNKPLTVL
TAAMNVTLALMDMQDVELVQLGGVVRKSSSSVVGHYAEEMLQSFACSKLFLSVDGISLEH
GLTTSNMMEAHLNAQMIQSVQKTIILADSRKFGRKGFGKICELEDIDVIITDSGIPEIYR
EKLEEKGIELVVV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggcagagcgacatcgttttattttggaggaattagacaaggctggatttgtg
acagtgtcagatctagcgaaggctatggatgtcactatggtaactgtccgaaaggatcta
aaagtcttggaggataaggggctattgtatcgatcccatggcagtgcaacttcggtttct
ccttatgtttctgaccgctctgttcaggtaaaaaagttggagcaggtggaggagaagtcc
aagattgctgagaaggccttagcctacattgaggatcaggaagcaatcatcattggctct
ggcaccacggtggtcgctttagcccaggctattcccagaaataaacccttgactgttctt
actgcagcgatgaatgtgactttagccctgatggacatgcaggatgtagagttagttcag
ctaggtggggttgtcagaaaaagtagtagctctgtagtgggacattatgcagaagaaatg
cttcagagttttgcttgcagcaaactttttttgagtgtggatggcattagtttggaacat
ggcttgacgacctccaatatgatggaggctcatttaaatgctcagatgatccagtctgtt
cagaaaacaataattttggcagacagccggaagtttggcagaaaaggctttggaaaaatc
tgcgaattggaggatatagatgtaataattactgattccggtatacccgaaatctaccgt
gaaaagctggaggaaaaggggattgaattggtggtggtttaa
DBGET
integrated database retrieval system
