KEGG   Algoriphagus sp. NBT04N3: GYM62_20340
Entry
GYM62_20340       CDS       T09623                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
algo  Algoriphagus sp. NBT04N3
Brite
KEGG Orthology (KO) [BR:algo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:algo03000]
    GYM62_20340
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:algo02048]
    GYM62_20340
Transcription factors [BR:algo03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    GYM62_20340
Prokaryotic defense system [BR:algo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    GYM62_20340
SSDB
Motif
Pfam: HTH_3 CofB_pilin_dom
Other DBs
NCBI-ProteinID: QYH41032
LinkDB
Position
complement(4688212..4688568)
AA seq 118 aa
MNIKPIKTETDYQKALIRLDEIFDAQKGSKKGDELEILSILVDQYEKENFPIDLPDPIEA
IKFRMEQMDLRNKDLAEVVGNKSRVSEVLNRKRKLSLDMIRKLNTYLRIPTEVLVQEY
NT seq 357 nt   +upstreamnt  +downstreamnt
atgaatatcaagcctatcaaaactgaaacagattatcaaaaagcactgattcgccttgac
gagatttttgatgctcaaaagggaagcaagaaaggagacgaactggaaatactttctatt
ctagtcgatcaatatgaaaaagaaaattttccgattgatctacctgatcccatcgaagct
atcaagtttcgaatggagcagatggatctcagaaataaagatcttgctgaggtggtagga
aataaaagtcgggtaagtgaagtgttgaatagaaaaagaaaactttcgctggatatgatt
cgaaaactgaacacctatcttcgaattcctacagaggtattggttcaggaatattga

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