Algoriphagus sp. NBT04N3: GYM62_20590
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Entry
GYM62_20590 CDS
T09623
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
algo
Algoriphagus sp. NBT04N3
Pathway
algo00260
Glycine, serine and threonine metabolism
algo00630
Glyoxylate and dicarboxylate metabolism
algo00670
One carbon pool by folate
algo00785
Lipoic acid metabolism
algo01100
Metabolic pathways
algo01110
Biosynthesis of secondary metabolites
algo01200
Carbon metabolism
Module
algo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
algo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GYM62_20590 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GYM62_20590 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GYM62_20590 (gcvP)
00670 One carbon pool by folate
GYM62_20590 (gcvP)
Enzymes [BR:
algo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
GYM62_20590 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
QYH41078
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Position
4739233..4742127
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AA seq
964 aa
AA seq
DB search
MKINLSNAVKFESRHNGPTEAEIAEMLDKIGASSLEELINQTVPESIQLERPLDLPKAKL
ESEFLRDFKKLASKNKVFKSFIGMGYYDTIVPGVVLRNVLENPGWYTAYTPYQAEIAQGR
LEALINFQTVVSELTGMELANASLLDEGTAAAEAMTMLHSVKPREKKNANKFFVDEKIFP
QTKALLETRAEPVGIELVFGSIEQMDVTDPELYGILFQYPDADGAVRDYSAIVAAAKENK
VLTAFASDLLALTLLTPPGEMGADVVVGSAQRFGVPMGYGGPHAGFFATKEEFKRQIPGR
IIGVSIDRAGNKAYRMALQTREQHIKREKATSNICTAQVLLAVMSSFYAVYHGPKGLKDI
ALRTHGFAKLTAQALKQVGLQVGEQTFFDTIEVKMNEVSRERVRGLALGEKMNFRYESES
IFISFDETKTLEDVKTIVNIFATEEGKHTLNLDELVSNLSLELPEALNRKSAYLTHPVFN
SFHSEHEMLRYIKRLEAKDLSLVHSMISLGSCTMKLNATAEMIPVTWPEFGQIHPFAPMD
QALGYQELFTNLRTWLTEITGFADTSLQPNSGAQGEYAGLMVIRAYHISRGEGHRNVALI
PTSAHGTNPASAVMAGMKVVLVKCDEKGNIDLADLKEKAAAHANDLSALMVTYPSTHGVF
EEAIQEICATIHEFGGQVYMDGANMNAQVGLTSPGRIGADVCHLNLHKTFCIPHGGGGPG
MGPICVAAHLAPFLPGNPLVKTGGTQAVSSISAAPYGSASILPISYAYIAMMGGDGLTNA
TKMAILNANYIKERLDGHYPILYTGTKGRAAHEMIIDCRSFKEFGVEVEDIAKRLMDYGF
HAPTVSFPVAGTMMIEPTESETKAELDRFCDALISIREEIREIERGESEKENNVLKNAPH
TANMVLIGEWDLPYSREKAVYPLGYLRDNKFWPTVRRIDSAYGDRNLMCSCIPVEEYANQ
EEMA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaacctttctaatgctgtcaagtttgagagcagacacaatggcccgaccgag
gcagagatcgcagagatgttggataaaatcggagcctcttccctggaggaattaatcaac
caaactgttccagaatccattcaattggagagaccattggatcttcccaaagctaagctg
gaatccgagtttttgagagacttcaaaaaactcgcctccaaaaacaaagttttcaaatcc
ttcatcggaatgggctattatgataccattgttcctggagtggttttgagaaatgtccta
gaaaatccgggatggtacactgcttacactccttaccaggccgagattgctcaaggtaga
ttagaagcgcttatcaatttccaaacagtagtcagcgaattgaccggaatggaattggca
aatgcttccttattggatgaaggtacagctgcagctgaggcgatgactatgcttcattct
gtgaagccgagagaaaagaagaatgcgaataaattctttgtagacgagaaaattttccct
cagaccaaggcgcttttggaaactagagcagaacctgtagggattgaattggtatttggg
tctatcgagcaaatggatgtgacggatccggaattatacgggattttgttccaatatccg
gacgctgatggtgctgtgagagattattcagcgatagtggctgctgcaaaagaaaataaa
gtattgactgcttttgcatcagacttactggccttgactttactgacacctccgggagaa
atgggagctgatgttgtcgtaggttccgcccagcgatttggagtacctatgggttatgga
ggtcctcatgcaggatttttcgccactaaggaagagttcaaaagacaaattccgggtaga
atcatcggtgtttccatcgatagagctggaaataaagcctatagaatggcgctccaaacc
agagagcaacatataaaaagagagaaagcaacttccaatatttgtaccgcacaggtacta
ttggcggtgatgtcctccttctatgcagtatatcatggccctaagggattgaaggatatt
gccttgagaacgcatggctttgcaaaattaactgctcaggctctgaagcaagttggactc
caggtaggagagcagacattcttcgacaccattgaggtgaaaatgaatgaggtttcccgc
gaaagagtaagaggcttggctttgggtgagaagatgaacttccgttacgagtcagagtcc
atcttcatctcttttgacgaaaccaagactctggaagatgttaaaaccatcgtcaatatt
tttgctacagaagaaggtaagcataccttaaacttggatgagttggtaagcaacttgagc
ttggaactaccagaagctttgaatagaaagtcagcctacctaacccacccagtattcaat
agctttcattcagagcatgaaatgcttcgctatatcaagcgtttggaagcaaaagatctt
tctttggttcattccatgatttctttgggttcttgtaccatgaaattgaatgcaactgca
gaaatgattcctgtaacttggccggaattcgggcagattcacccatttgctccaatggat
caagctttaggctatcaggagttatttaccaatttgagaacttggttaacagaaatcacc
ggttttgccgatacttctttgcagcctaattctggagcgcaaggagagtatgcaggtttg
atggtaatccgtgcgtatcacataagccgtggcgaagggcatagaaatgtagccttgatc
ccaacatcagctcatggtaccaacccggcttctgctgtaatggcagggatgaaagtagtt
ttggtgaaatgtgatgaaaaaggaaatattgatttggctgacctgaaggaaaaggcggca
gctcatgcaaatgacttgtcagctttgatggttacctatccttccactcacggagtattt
gaagaagcgatccaagaaatctgtgcgactattcatgaatttggtggtcaagtgtacatg
gatggagcgaatatgaatgcacaagtaggtttgacttctccgggtagaatcggggcggat
gtttgtcacttgaacttgcacaagactttctgtattcctcacggtggaggtggacctggc
atgggaccaatctgtgtggcagctcatttggccccgttccttccaggaaatcctttggtg
aaaactgggggtactcaggcagtatcttctatctcagcagctccttatggaagcgcaagt
atcttgcctatctcctatgcctacattgcgatgatgggaggcgatggacttactaatgct
accaagatggcgattctaaacgccaactatatcaaagagcgattagacggtcattatcct
atcctttatacaggaaccaaaggaagagcagctcacgagatgatcatcgactgcagaagc
ttcaaggaatttggagtagaagtggaggatatcgcgaagcgtttgatggattatggtttc
cacgctcctacggtttctttcccagtagcgggtaccatgatgattgagccaacagagtct
gaaacaaaggcggaattggatagattctgtgatgccttgatttccatcagagaagaaatc
agagaaatcgagaggggggaatcagaaaaagagaacaacgtattgaagaatgctccgcat
actgccaatatggtattgatcggagaatgggatctgccttattcaagagaaaaagctgtt
tatcctttgggttatttaagagacaataaattctggcctactgtcagaagaattgattct
gcctacggagatagaaacttgatgtgtagctgtattcctgtggaggaatatgctaatcaa
gaggaaatggcttaa
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