Altererythrobacter sp. BO-6: G6N82_02405
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Entry
G6N82_02405 CDS
T06465
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alh
Altererythrobacter sp. BO-6
Brite
KEGG Orthology (KO) [BR:
alh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alh03032
]
G6N82_02405 (topA)
03400 DNA repair and recombination proteins [BR:
alh03400
]
G6N82_02405 (topA)
Enzymes [BR:
alh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G6N82_02405 (topA)
DNA replication proteins [BR:
alh03032
]
Prokaryotic type
DNA Topoisomerases
G6N82_02405 (topA)
DNA repair and recombination proteins [BR:
alh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G6N82_02405 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIG53156
UniProt:
A0A6G6X6R2
LinkDB
All DBs
Position
complement(494220..496757)
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AA seq
845 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGKDFKVLASFGHVRDLPPKDGSVRPDEDFAMDWELYRDKQS
RFKEIADAAKNASRLVLATDPDREGEAISWHVQELLKKRKVLPAKVDRVTFNAITKNAVT
EAMKSPRELDQPLIDAYLARRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLIVDRE
REIEAFRADEYWSVVAKLAHDGTDFDARLVKFEGRKLDKLSLGNEGSAMAAKAAVEAGRF
TVEEIETKPLKRNPAPPFTTSTLQQEAARKLGFSASHTMRLAQNLYEAGAITYMRTDGVQ
MDAGAIMALRDAIGERYDSAYLPEKPRFYSTKAKNAQEAHEAIRPTDFRREHAGSGDEAK
LYQLIFKRAMASQMAAAQLERTTVTLRDPTGAHELRATGQVVKFPGFLAVYQEGFDDPED
DEDGLLPVMRKGDSPAKRAVEANQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQTL
RDRDYVRMEKNRFFAEESGRLLTAFLERFFPTYVAYDFTAGMEDELDTVSDGREEYKELL
TKFWADFKPKADEVMDKLPSEVTEALDDYLSDYLFPPREDGADPRGCPLCRDEGREGGRL
SLRGGRFGAFVACNNYPECKYTRRFAQPGGNGEENGEDGVLGTHPETGLPIHRKTGRFGP
YVEMGEGKEAKRASIPKDLDDFDLDWAVKLLDLPRIIGAHPDTGLEIEANIGRYGPYLRH
DGKYGKLSNTREVFEVGMNRAVDILAQAANRGGGGTRGPNGSRAEPIKTLGTHPTSGGEI
KVMPGRYGPYVTDGTTNATIPKDVKPEDVTEAQAIELIDARAAKGPAKKKGRKKAAPKKK
AAKAK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgttatcgtcgaatcgccggccaaggcgaaaaccatcgagaaatacctcggc
aaggacttcaaggttctcgccagcttcgggcatgtccgcgacctgccgcccaaggatggc
agcgtgcgcccggacgaggatttcgcgatggactgggaactctatcgcgacaagcagagc
cgcttcaaggaaatcgccgacgctgccaagaacgcctcgcgcctggtgctcgcgaccgac
cctgaccgcgaaggcgaggcgatcagctggcacgtgcaggagctgctgaagaagcgcaag
gtcctccccgccaaggtcgatcgcgtcaccttcaatgcgatcaccaagaatgcggtaacg
gaagcgatgaagagcccgcgcgagctcgaccagcctctgatcgacgcctatctggcgcgg
cgcgcgctcgattacctgttcggcttcaccctcagccccgtgctgtggcgcaagctgccg
ggcgccaaaagcgcggggcgcgtgcaatcggtggccctaaggctgattgtcgaccgcgag
cgcgagatcgaagccttccgggccgacgaatactggtcggttgtggccaagctggcgcat
gacggcacggattttgacgcgcgcctggtgaaattcgaaggccggaagctcgacaagctg
agccttggcaatgaaggcagcgcgatggcggccaaagccgcggtcgaggcagggcgcttc
acggtcgaggagatcgagaccaagccgctcaagcgcaatcccgcgccgccgtttaccacg
tccaccttgcagcaggaggccgcgcgcaagctgggcttttccgctagccacacgatgcgg
ctcgcgcagaacctctatgaagccggcgcgatcacctacatgcggaccgacggggtacag
atggatgcgggggcgattatggctctgcgcgatgccatcggcgaacgttatgacagcgcc
tacctgcctgaaaaaccgcgcttctattcgaccaaggcgaaaaacgcgcaggaagcgcac
gaagcgatccggccgaccgattttcgccgcgagcatgccggttcgggcgacgaggccaag
ctgtaccagctgatcttcaagcgcgcgatggcgagccagatggccgccgcgcagctggag
cggaccacggtaaccttgcgcgatcccaccggcgcgcatgaactgcgcgcgacagggcag
gtcgtgaaatttcctggcttcctggcggtgtaccaggaaggcttcgacgatcccgaagat
gacgaggatggcctgctgccggtgatgcgcaagggcgacagcccggcaaagcgcgcggtc
gaggcgaaccagcacttcacccagccgccgccgcgcttttccgaagcctcgctggtcaag
cggctggaagagcttgggatcgggcgaccgtcgacctatgcctcgaccatccagacgctg
cgcgatcgcgactatgtgcggatggagaaaaaccgtttctttgcagaggaatccgggcga
cttctcacagcctttctcgaacgcttcttccccacctatgtcgcctatgacttcaccgcg
gggatggaggacgagctcgacacggtttccgacgggcgcgaggaatacaaggagctgctc
accaagttctgggccgacttcaagcccaaagccgatgaggtaatggacaagctgccttcg
gaagtgaccgaggcgctggacgattacctgtcggactatcttttcccgccacgcgaggat
ggtgccgatccgcgcggatgcccgctgtgccgggatgaagggcgcgagggcggtcggctg
agcctgcgcggtggccgcttcggcgcctttgtcgcctgcaacaactatcccgaatgcaaa
tatactcgccgctttgcccagccgggcggcaatggcgaggagaatggcgaggatggtgtg
ctcggcacccatcccgaaaccggcctgccgatccatcgcaagaccgggcgcttcggccca
tatgtcgaaatgggcgagggcaaggaagcgaagcgcgcgtcgatccccaaggatctcgac
gatttcgatctcgactgggcggtgaagctgcttgacctgccccgcatcatcggcgcgcat
ccggatacggggctggaaatcgaagccaatatagggcgttacggcccctatcttcgccat
gacgggaaatatggaaagctctcgaacacccgtgaagtgttcgaagtgggcatgaaccgc
gcggtcgatatcctggcgcaggcggccaatcgcggtggcggcgggacgcggggcccaaat
ggttctcgggcagagccgatcaagacgcttggcacgcatcccaccagcgggggcgagatc
aaggtcatgccgggccgctacggcccctatgtcaccgatggcaccaccaatgcgaccatc
cccaaggatgtgaagcccgaggacgtgaccgaggcgcaggcgatcgagctgatcgatgcc
cgcgccgcgaaaggccccgcgaagaaaaagggtcgcaagaaggccgcgccgaaaaagaag
gcggcaaaggccaagtaa
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