Altererythrobacter sp. BO-6: G6N82_03055
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Entry
G6N82_03055 CDS
T06465
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
alh
Altererythrobacter sp. BO-6
Brite
KEGG Orthology (KO) [BR:
alh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alh03019
]
G6N82_03055 (hrpB)
Enzymes [BR:
alh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
G6N82_03055 (hrpB)
Messenger RNA biogenesis [BR:
alh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G6N82_03055 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
Flavi_DEAD
AAA_30
CON_HrpB
AAA_19
Cas3-like_C_2
DUF3726
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIG53264
UniProt:
A0A6G6X714
LinkDB
All DBs
Position
complement(625933..628365)
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AA seq
810 aa
AA seq
DB search
MPEQLPIQEVLPELLRALDVHGAAVLVAPPGAGKTTAVAPALLDQPWCTGQIILTSPRRV
AARAAAERMAEMLGEQPGETVGYLTRLDSKTSAKTRILVVTEAIFVNRIVEDPELAGVSA
VLFDEAHERHLDSDLGLALALESRAVLREDLRVLVMSATIDGARFARLIGEGAPVIESEG
RAYPLEIRWLGARPDARIEDAMADAVMQAWRDEQGDILAFLPGVGEIERTRERLEARLPE
VPVLPLHGQVEPSGQRAAIRRDLHGRRRIVLATAIAETSLTLDGVSVVVDSGLARHAEYD
KAAGTTHLVTRRASQAAAAQRAGRAARQGPGIAYRLWEQHGHAGRPEFDPPEIVTADLAP
LVLTLAQWGTPDPASLPWLDPPPAPAVAAARSQLERLGALDGEGRITPRGQQIASLPLDP
VGAAAVLFGAEAGQAEEAAKLVLLMQERGLGGRGEDLLQRLSRWDSERGSRAEASRKLAQ
RWALAAERLIPATRNEALNPALFLALARPDFIARRRDPSGEQWLSAGGRGFQLDPASPLA
RAEWLVIGDAQGQAKGARITAAAELSPQEVETRLAEMIEKRSVIRWNRDEKRVEARLERR
LGAITLASGPDPDPDPEAIVDKLVEKAVEKLGELVPKDLLARGTFSGVKALEIGHLQASA
ADWLRPLLEGRRDLEVSRGRLVEAILNQLDWGDRQLLDREAPREFASPAGTHHPIDYAGD
DAPSVEVRVQALFGLDRHPLIGRTPLLLKLTSPAGRPIQSTRDLPGFWRGSWADVKKDMK
GRYPKHRWPDEPWAEKPSLKTKNAFSKDQG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaacagctgcccatccaagaggttctgccagagctgctgcgcgcgctcgatgtg
cacggcgcggcggtgctggttgcccctccgggggcaggcaagacgactgcggtggcgccc
gcgctgctcgatcagccgtggtgcaccgggcagatcatcctgacgtctccgcggcgggtg
gcggcgcgtgccgccgccgaacggatggccgaaatgctgggcgagcagcccggcgaaacc
gttggctacctcacccggctcgacagcaagacctcggccaagacccgcatcctcgtcgtg
accgaggcgatcttcgtcaatcgcatcgtcgaggatcccgaactggccggggtttccgcc
gtgctgttcgatgaggcgcatgagcggcacctcgacagcgatcttggcctggcgctggcg
ctggaaagccgcgcggtgctgcgcgaagacctgcgcgtgctggtgatgtcggcgacgatc
gatggcgcgcgctttgcgcggctgattggagagggcgcaccggttatcgaaagcgaaggg
cgcgcctatccgcttgagatccgctggcttggcgcccgccccgatgcgcggatcgaggat
gcgatggccgatgcggtgatgcaggcatggcgcgacgagcaaggcgatatcctcgccttt
ctgccgggtgtcggcgagatcgagcggacccgcgagcggctggaggcgcggctgcccgag
gttccggtgctgcctctccacggccaggtcgaaccaagcggccagcgcgcggcgatcagg
cgtgacctgcacgggcggcggaggattgtgctcgcaactgcgatcgccgaaacctcgctc
acgctcgatggcgtgtcggtggtggtcgacagcgggctggcgcgtcatgccgagtatgac
aaggctgcggggacgacgcatctcgtcacgcgccgggcgagccaggcggcagcggcgcaa
agggcagggcgtgcggcgcggcaggggccgggcatcgcctaccgcctgtgggaacagcac
ggccatgccgggcggcccgaattcgatccgcctgaaatcgtcaccgccgacctggcgccc
ctggtgctgacgttggcgcaatggggcacgcccgatccggcgtcgctgccatggcttgac
ccgccgcctgcgcctgcagtggctgctgcacgttcgcagcttgagcggcttggggcgctg
gatggtgaggggcggatcacgccgcgtggacaacagatcgcgtcgctgccgcttgatcca
gttggcgccgctgccgtgctgtttggcgccgaagcgggccaggccgaggaggcagcgaaa
ctggtgctgctgatgcaggagcgcggactgggcgggcgcggagaggatttgctgcagcgg
ctttcgcgttgggatagcgaacggggcagtagggccgaagcttcgcgtaagctggcacag
cgctgggctcttgcggctgagcggctgatacccgccacgcgcaatgaagcgctcaatccg
gcgctgttccttgcgctggcccgccccgatttcatcgccaggcggcgggacccgagcggc
gagcaatggctttcggccgggggcaggggcttccagcttgatcccgcatcgccactggca
cgggccgagtggctggtgatcggcgacgcgcaggggcaggcaaagggcgcgcggatcacc
gcggcggccgagttgagcccgcaagaggttgagacccgacttgcggaaatgatcgaaaag
cgctcggtaattcgctggaatagagatgaaaaacgcgtcgaagcacggctcgaaaggcgg
ctgggggcgatcacactggccagcggtcccgacccggatcccgatcccgaagcgattgtg
gataaactcgtggaaaaagcggtggagaagctgggggaactggtcccgaaagacctcctg
gctcggggaacgttctcaggggtcaaggcgctggaaatcggtcatttgcaggcgagtgcc
gctgactggctgcggcccttgttggagggacggcgcgacctggaagtatcgcgcggaaga
ctggtcgaggcgatcctgaaccagctcgactggggcgaccgacaactgctcgaccgcgag
gcaccgcgcgaattcgcctctcctgccggtacgcaccacccgatcgattacgccggtgac
gatgcccccagcgtcgaggtgcgggtccaggccttgttcgggctcgatcgccatccgctg
atcgggcgcacgcctttgctgctcaagctcaccagcccggcgggccgcccgatccagtcg
acccgcgacctgcctggcttctggcgcggcagctgggccgatgtgaagaaagacatgaaa
ggccgctatcccaagcatcgctggccggatgagccatgggcggaaaagccgagtttgaag
accaagaacgccttttcaaaggaccaaggctga
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