Azospirillum lipoferum: AZOLI_1068
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Entry
AZOLI_1068 CDS
T01658
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ali
Azospirillum lipoferum
Brite
KEGG Orthology (KO) [BR:
ali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ali03016
]
AZOLI_1068 (rnd)
Enzymes [BR:
ali01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AZOLI_1068 (rnd)
Transfer RNA biogenesis [BR:
ali03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AZOLI_1068 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
CBS86395
UniProt:
G7Z645
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All DBs
Position
complement(1007760..1008950)
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AA seq
396 aa
AA seq
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MTLITTTDALQAFCQSLAGAEYITVDTEFLREKTYWPQLCLVQVGGPDGAVAIDPLAEGI
DLAPLFALMSDPSVLKVFHAARQDVEIFWHLSGQIPHPLFDTQVAAMVCGFGESVGYETL
VTKLAGARIDKSSRFTDWSHRPLTERQLTYALSDVIHLRPAYEKLKRRLARSGRSHWLEE
EMAILTDPATYQVDPESSYMRLKVRTNKPRFMAILKELAAWREREAQRRDQPRSRVLRDE
ALLEIAAHAPTTVDDLARTRGLGRGFAEGRQGTDVLAAVQAGLDLPDSALPRVEPREEPP
PGLQPIVELLRVLLKMKCDENNVAAKLVASSADLEALAADDAADIPAMHGWRRELFGSDA
LALKHGKIGLAVIDRRVRIVPAGEPRPSAAPVDSET
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcatcacgacaaccgacgccctccaggccttctgtcagtcgctggccggggcc
gagtacatcacggtcgacaccgagttcctgcgggaaaagacctattggccgcaattgtgc
ctcgtgcaggtcggcggacccgacggcgcggtcgccatcgacccgctggccgagggcatc
gaccttgcaccgctgttcgcgctgatgagcgacccgtcggtgctgaaggtgttccatgcc
gcccgccaggacgtggagatcttctggcacctgtccggccagatcccgcatccgctgttc
gacacccaggtcgcggcgatggtctgcggcttcggcgaaagcgtcggctacgagacgctg
gtgaccaagctggccggcgcccgcatcgacaagtccagccgcttcaccgactggtcccac
cgcccgctgaccgaacggcagctgacctacgccctgtccgacgtgatccacctgcgcccg
gcctatgagaagctgaagcgccgcctcgcccgctccggccgctcgcactggctggaggag
gagatggcgatcctcaccgatccggcgacctatcaggttgacccggaaagctcgtacatg
cggctgaaggtgcggaccaacaagccgcgcttcatggcgatcctcaaggagctggcggcg
tggcgcgagcgcgaagcccagcgccgcgaccagccgcgctcccgcgtgctgcgcgacgaa
gcgcttctggagatcgccgcccacgcccccaccaccgtcgacgacctcgcccgcactcgc
gggctgggccgcggattcgcggaggggcggcagggaaccgacgtgcttgccgcggtgcag
gctgggctggacctgccggacagcgccctgccgcgggtcgagccgcgcgaggaacccccg
cccggcctgcaacccatcgttgagcttctgcgcgtgctgctgaagatgaaatgcgacgag
aacaatgtcgcggcgaagcttgtggcctcgtctgccgatttggaggctttggccgccgat
gacgcggcagacattccggcgatgcacgggtggcggcgcgagctgttcggcagcgatgcg
ctcgccttgaaacacggaaagatcggacttgcggtcatcgaccgtcgcgtccgcatcgtt
cctgccggagaaccgcgcccgtcggccgcgccggtcgattcggaaacttga
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