Azospirillum lipoferum: AZOLI_1815
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Entry
AZOLI_1815 CDS
T01658
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ali
Azospirillum lipoferum
Brite
KEGG Orthology (KO) [BR:
ali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ali03032
]
AZOLI_1815 (topA)
03400 DNA repair and recombination proteins [BR:
ali03400
]
AZOLI_1815 (topA)
Enzymes [BR:
ali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AZOLI_1815 (topA)
DNA replication proteins [BR:
ali03032
]
Prokaryotic type
DNA Topoisomerases
AZOLI_1815 (topA)
DNA repair and recombination proteins [BR:
ali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AZOLI_1815 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Mur_ligase_C
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CBS87077
UniProt:
G7Z7Y8
LinkDB
All DBs
Position
1703551..1706337
Genome browser
AA seq
928 aa
AA seq
DB search
MPGSNVVIVESPAKAKTINKYLGDDYTVIASFGHVRDLPARDGSVRPDEDFAMEWELGDR
SKRHIDEIAKAVKSADRVYLATDPDREGEAIAWHLSELLREKHLTDNRDVQRITFNEITK
SAVQAAIANPRDVSRELVDAYLARRALDYLVGFTLSPVLWRKLPGSKSAGRVQSVALRLI
CERESEIEVFKPQEYWSIAVGFTTPAGAGFTASLTQLDGKRLDKFGLPNREAAEAAVAKI
LPQSFAVSSVERKQSRRNPSPPFTTSTLQQEASRKLGFGATRTMRTAQKLYEGVDIGGET
VGLITYMRTDGVSLSQEAIDGARSLIGSQYGERYVPAQPRVYKTAAKNAQEAHEAIRPTD
LQRRPDSVAGYLESDELRLYELIWKRTLASQMESAVLDQVAVDIANPSKDVVLRATGSIV
VFDGFLKVYQEDRDDAAEDDQQERRLPAMDQGDALARGDIAQDQHFTQPPPRYSEASLVK
KLEELGIGRPSTYASILQVLQDRNYVRLDKRRFIPEDRGRLVTAFLENFFHRYVEYNFTA
ELENQLDEISDGKIDWKTVLRDFWTAFDVAVNGTKDLTITQVLTTLDNELGAHFFPAATA
DGHDPRVCPVCREGRLGLKLGKMGAFIGCSRYPECRYTRPLAVANDENGEAQEGPRELGN
DPETGLPVTVRRGPYGAYIQLGPAPTVAAPPEEPAVEEPAADGKKPKAKKKKKDEAPKPK
RVSLPKGMAAADVDLDTALKLLALPRTIGNHPETGEEISAGIGRFGPYLKHGSVYKSLTP
DDDVLTIGINRAVDLLAGAAKKASAPAKTLGDHPKTGKPITMGSGRFGPYVKHASVYASI
PKGTEPDSVTLEQALELIDAKVAKDAAKKGKAPKDAEPAKAEGAEAEKPAKAKAAAKKPA
AKKATKAKAAKDAPAEAAAPKKKTAKAS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
ttgccgggcagcaacgtcgtcatcgtcgaatcgccggccaaggcgaagaccatcaacaag
tatctgggcgacgactataccgtcatcgccagcttcggccatgtccgcgaccttccggcg
cgggacggttcggtgcgcccggatgaagacttcgcgatggaatgggagctgggcgaccgc
tccaagcgccacatcgacgaaatcgccaaggcggtgaagtcggccgatcgcgtctatctc
gcaaccgacccggatcgcgagggagaggccatcgcctggcacctgtcggagctgctgcgc
gaaaagcacctgaccgacaatcgcgacgtccagcgcatcaccttcaacgagatcaccaag
agcgcggtgcaggccgccatcgccaacccgcgcgacgtgtcgcgcgaactggtcgacgcc
tatctggcgcgccgggcgctggattatctggtgggcttcacgctgtcgccggtgctgtgg
cgcaagctgccgggctccaagtcggccggccgcgtgcagtcggtggcgctgcgcctgatc
tgcgagcgcgaatcggagatcgaggtcttcaagcctcaggaatactggtccatcgcggtc
ggcttcaccacgccggccggggccggcttcaccgcgtcgctgacccagctggacggcaag
cggctcgacaagttcggcctgcccaaccgcgaggccgccgaggccgcggtggcgaagatc
ctgccgcagagcttcgccgtgtcgtcggtggagcgcaagcagagccgccgcaacccgtcg
ccgcccttcaccacctccaccctgcagcaggaggcctcgcgcaagctgggcttcggcgcc
acccgcaccatgcggaccgcgcagaagctgtatgagggcgtggacatcggcggcgagacg
gtcggcctcatcacctatatgcgaaccgatggcgtcagcctgtcgcaggaggccatcgac
ggcgcccgcagcctgatcggcagccagtatggcgagcgctatgtcccggcccagccgcgt
gtctacaagaccgccgccaagaacgcccaggaggcccacgaggccatccggccgaccgac
ctgcagcgccgtcccgactcggtcgccggctatctggaaagcgacgagctgcggctctat
gagctgatctggaagcgcactctggccagccagatggaaagcgccgtgctggatcaggtg
gcggtggacatcgccaacccgtcgaaggacgtggtgctgcgcgccaccggctccatcgtc
gtgttcgacggcttcctgaaggtctatcaggaggaccgcgacgacgccgccgaggacgac
cagcaggaacgccgcctgccggcgatggaccagggcgacgctctggcccgcggcgacatc
gcccaggaccagcatttcacccagccgccgccgcgctattccgaagccagcctcgtcaag
aagctggaggagctggggatcggccggccgtccacctacgcctcgatcctgcaggtcctg
caggaccgcaactatgtgcggctggacaagcggcgcttcatcccggaagaccgcggccgg
ctggtgaccgccttcctggagaatttcttccaccgctatgtggagtacaacttcacggcg
gagctggagaaccagctggacgagatatccgacggcaagatcgactggaagaccgtcctg
cgcgacttctggaccgccttcgacgtggcggtgaacggcaccaaggatctgacgatcacc
caggtgctgaccacgctcgacaacgaactcggtgcccatttcttccccgccgccaccgcg
gacggccacgacccgcgcgtctgcccggtctgccgcgagggccggctggggttgaagctg
ggcaagatgggcgccttcatcggctgctcgcgctatcccgaatgccgctacacccggccg
ctggccgtcgccaacgacgagaacggcgaggcgcaggaaggcccgcgcgagctgggcaac
gatccggaaacgggtctgccggtgacggtgcgccgcggcccctatggcgcgtacatccag
ctgggcccggcgccgaccgtcgccgccccgccggaggaaccggccgtcgaggaacctgcg
gcggacggcaagaagcccaaggcgaagaaaaagaagaaggacgaggcgccgaagcccaag
cgggtgtcgctgcccaagggcatggccgcggcggacgtcgatctcgacaccgcgctgaag
ctgctggccctgccccgcaccatcggcaaccatccggagaccggcgaggagatcagcgcc
ggcatcggccgcttcggtccctacctgaagcacggcagcgtctacaagtcgctgacgccc
gatgacgacgtgctgaccatcggcatcaaccgcgccgtcgacctgctggccggcgccgcc
aagaaggcgtcggccccggccaagacgctgggcgaccaccccaagaccggcaagccgatc
accatggggtcgggccgcttcggcccctatgttaagcacgccagcgtctatgcctcgatc
ccgaaggggaccgagccggacagcgtcacgctggaacaggcgctggaactgatcgacgcc
aaggttgccaaggacgccgccaagaagggcaaggctccgaaggacgccgaaccggcaaag
gccgagggtgcggaggcggagaagcccgcaaaggccaaggctgcggccaagaagcccgcc
gccaagaaggcgaccaaggccaaggccgccaaggacgctccggcggaagccgccgcgccg
aagaagaagaccgccaaggcatcgtaa
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