Azospirillum lipoferum: AZOLI_2012
Help
Entry
AZOLI_2012 CDS
T01658
Name
(GenBank) putative UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ali
Azospirillum lipoferum
Brite
KEGG Orthology (KO) [BR:
ali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ali03400
]
AZOLI_2012
Enzymes [BR:
ali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZOLI_2012
DNA repair and recombination proteins [BR:
ali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AZOLI_2012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
CBS87253
UniProt:
G7Z8H9
LinkDB
All DBs
Position
complement(1880968..1884228)
Genome browser
AA seq
1086 aa
AA seq
DB search
MSTHSPIAATSFPSLSPIDVVTASAGTGKTYRLATAFRDAVAAGTEPGRILATTFTRKAA
AELLERVRQRLIAEGHGDAARDVLTGAIGTVNAVFGCIAAAFALEAGRSPVADVIGEDRM
AALFAAAADTVIRRHGSAIEPAAWRLRVEDWRDLVRRVSALARQNAIAPADLAASAARSL
DGLLTLLPPPAADGAALDAALGRAVRDAVSAIEGGGEVTVKKTQDAFALLKEAAAALANG
RPLAWADWVRLAKLDAGARWKGVAEAVVTAAEAHDRHPRLHADLRALVDGVFSCAAEAMA
DYAEFKRIQGLVDFVDQEQEALALLRRSDVRSLLAERFELALVDEFQDTSPIQLALFLEL
AGIVRRSVWVGDAKQAIYGFRGTDPDLIRAVVARVPPATGGWLERLPRSYRSRPGLVAFH
NDLFGAAFPPTGIPQDQAIVSECDRSDRPGEPSPLEIWTLEGKNWDKALAALARGVANRL
AAEGVDGALRGSDVAVLCRSNERCAAVAATFAAAGLKVAIGRSGLTATPEAGLALAALRY
LVDPGDTLAMVELAHLATMPDTAEDAAAGQPDWLETWLAPDAARRAREGSPVLRALDAAR
DRLLHLTPVEALEVAIAAGSVTDAVLRWGGGAERLGNLDALRGLARAYEDDCRARRAAAT
AGGLIGFLSDAEKGGEQPPSGDRNAVQVMTYHQSKGLEWPMVVLLDLQGGPEPSAFGLTV
EGPAAEDGAAVDPWCPLDGRWLRFWPWPYDKQRARIPLADATDAAPEMAVARRRAHAEAV
RLMYVGMTRARDRLILAARPAKAGGLETDWLDALVDARGLPVLALPAGQGAVTVHAAGRP
HPATAITIAAPEEDGAAPQPAAVHAVFSLPPAPAAVPDHPPLRLAPSHFGIPAPVVAAAG
APAAIALGDRLPLAGGVDVTRLGEAIHSFLAVDRPDAAPEDRLACAARLLERWGIEPTAA
APLVEAGDRLWRALSRLWPGAGWRTEVPVHGRLGLQRIGGRIDLLVDAADGVVIIDHKAF
PGAFDQWAARALAHAPQLSLYRRMVEEATGSPVRGCFIHMPVVGMLLDLTRETGTREMGA
TCFHAR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacccattccccgattgccgccacctcctttccatccctgtcccccatcgacgtg
gtgacggccagcgccggcaccggcaagacctatcgcctcgccaccgccttccgcgacgcg
gtggcggcggggacggagccggggcgcatcctggccaccaccttcactcgcaaagcggcg
gcggaactgctggaacgggtgcgccagcgcctgatcgcggaggggcatggcgatgccgcg
cgggacgtcctgaccggcgccatcggcacggtcaacgccgtcttcggctgcatcgcggcg
gccttcgcgctggaggcggggcgatccccggtggccgacgtgatcggcgaggaccggatg
gccgccctgttcgccgccgccgccgacaccgtgatccgccgccacggttccgccatcgaa
ccggcggcgtggcgcctgcgggtggaggactggcgcgaccttgtccgcagggtcagcgcg
cttgcccggcagaacgccatcgccccggcggatctggcggcgtcggccgcgcggtcgctc
gacgggctgctgacgctgctgccgccaccggctgctgatggtgccgctctcgacgccgcg
ctggggcgggcggtgcgggacgccgtgtcggccatcgaaggcggcggcgaggtcacggtt
aaaaagacccaggatgcgttcgccctgctgaaggaggccgcggcggcgctggccaacggc
cggccgctcgcctgggccgactgggtgcggcttgccaagctcgacgccggggcgcgctgg
aagggggtggctgaggccgtcgtcaccgccgccgaggcgcatgaccgccatccccgcctg
cacgccgacctgcgcgccctggtggacggcgtgttcagttgcgccgccgaagccatggcc
gattatgcggagttcaagcggatccagggtctggtcgatttcgtcgaccaggaacaggaa
gccctggccctgctgcgccgttccgacgtgcgcagcctgctggcggagcgcttcgaactg
gcgctggtggacgaattccaggacaccagcccgatccagctcgccctgttcctggaactg
gcggggatcgtccgccgctccgtctgggtcggtgacgccaagcaggcgatctacggcttc
cgcggcaccgaccccgacctgatccgcgccgtcgtcgcccgggtgccgccggcgaccggc
gggtggctggaacggctgccgcgcagctaccgctcccgtcccggtctggtggccttccac
aacgacctgttcggcgccgcctttccgcccaccggcattccacaggaccaggccatcgtc
agcgagtgcgaccgcagcgaccggccgggcgaaccgtcgccgctggagatatggacgctg
gagggcaagaactgggacaaggcgctggccgccctcgcccgtggcgtcgccaaccggctg
gctgcggagggtgtggatggcgcgctccgcggatcggacgtcgccgtgctgtgccggtcc
aacgagcgttgcgcggcggtggccgccaccttcgccgccgccgggctgaaggtcgccatc
ggacgctccgggttgaccgcgacgccggaggccggtctggcgcttgccgccctgcgctat
ctggtcgatcccggcgacaccctggcgatggtcgagctggcccatctggcgacaatgccg
gatacggccgaagatgccgcagcggggcagccggattggctggagacctggctggcgccg
gacgccgcccggcgcgcgcgggagggttcgccggtcctgcgcgccctggacgccgcccga
gaccggctgctgcacctgacaccggtggaggcgctggaggtggcgatcgccgccgggtcg
gtgaccgacgcggtcctgcgctggggcggcggcgctgaacggcttggcaatctcgacgcg
ctgcgcgggcttgccagggcctacgaggacgattgccgggcgcgccgcgccgccgcgacc
gccggcggtctgatcggctttctgtccgatgccgaaaagggcggcgaacagccgcccagc
ggcgaccgcaacgccgtgcaggtgatgacctatcaccagtcgaaggggctggaatggccg
atggtcgtcctgctcgacctccagggcgggccggaaccgtcggccttcggcctcacggtg
gaggggccggcggcagaggatggggcggcggtcgacccctggtgtccgctggacggtcgg
tggctgcggttctggccctggccgtatgacaagcagcgcgcgcggatcccgctcgccgat
gccacggacgccgcaccggaaatggcggtcgcccgccgccgtgcccatgccgaagccgtg
cgcctgatgtatgtcggcatgacgcgcgcgcgagaccggctgatcctggcggcacggcct
gcgaaggccggcgggctggagacggactggctcgacgcccttgtcgacgcacgggggctg
ccggtgctggcacttccggccggacagggcgccgtgaccgtccatgccgccggacggccc
catccggccaccgccatcaccatcgccgccccggaggaggacggtgctgcgccgcagccc
gctgcggttcatgccgtcttttcgctgccgcccgcgccggccgccgtccccgatcatccg
ccgctccgcctcgctcccagccatttcggcatcccggctccggttgtcgccgcggccggc
gctccggcggcgatcgccctgggggaccgcctgccgctggccggaggcgtcgacgtgacg
cgccttggcgaggccatccactccttcctggcggtcgaccgtccggatgccgcgccggag
gatcggctggcctgtgccgcgcggctgctggagcgctgggggatcgagccgacggccgcc
gctcctctggtggaggccggtgaccgcctgtggcgcgcgctgtcacggctttggccgggg
gcgggctggcggacggaggtgcccgtgcatgggcgcctgggtctccagcggatcggcggg
cggatcgacctgctggtggatgccgccgacggggtggtgatcatcgaccacaaggccttt
ccgggggctttcgaccaatgggccgcccgcgcgctggcacacgcaccgcaactgtcgctc
tatcgccgcatggtggaggaggcgacgggatccccggtgcgcggatgcttcatccatatg
ccggtggtcgggatgctgcttgacctgacgcgcgagaccgggacgcgtgagatgggggcg
acctgcttccatgcccgctga
DBGET
integrated database retrieval system
