Azospirillum lipoferum: AZOLI_3071
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Entry
AZOLI_3071 CDS
T01658
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ali
Azospirillum lipoferum
Brite
KEGG Orthology (KO) [BR:
ali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ali03016
]
AZOLI_3071 (truB)
Enzymes [BR:
ali01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AZOLI_3071 (truB)
Transfer RNA biogenesis [BR:
ali03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AZOLI_3071 (truB)
Prokaryotic type
AZOLI_3071 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
X-Tfes_XVIPCD
Motif
Other DBs
NCBI-ProteinID:
CBS88237
UniProt:
G7Z4A9
LinkDB
All DBs
Position
complement(2884199..2885140)
Genome browser
AA seq
313 aa
AA seq
DB search
MARKRKGTPIHGWVVLDKPEGMTSTQALSKVRRLLNAEKAGHGGTLDPLATGILPIALGE
ATKTVSYAMDGAKTYRFSIRWGERTTTDDREGAVIDRSDHRPSTDAIRAALPAFLGEIQQ
VPPQFCAIKIDGERAYDIAREGDAVDLAARTVRIDRFELVEEPDADHAVFEVDCGKGTYV
RSLARDLAEALGTVGHVGLLRRLRVGSFTLDRAISLDELAAMEQGAAVERLLLPIETALD
DIPALALTEAEAHRLRHGQTVALLTRQDRDRLMAVQGADGGDGTVIALFGGTPVALARVE
GAEVRPVRVLNLT
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggctcgtaagcgcaagggtacgccgatccatggctgggtcgtgctggacaaacccgag
ggcatgacctccacccaggcattgtcgaaggtgcgccgcctgctgaacgccgagaaggcc
gggcatggcggcacgctcgacccgctggcgaccggcatcctgccgatcgcgctgggcgaa
gcgaccaagaccgtctcctacgccatggacggcgccaagacctaccgcttctccatccgc
tggggtgagcggacgaccacggacgaccgcgagggcgcggtgatcgaccgctccgaccac
cggccgagcacggacgcgatccgtgccgccctgcccgccttcctgggcgagatccagcag
gtgccgccgcagttctgcgccatcaagatcgacggcgagcgcgcctacgacatcgcgcgc
gaaggcgatgcggtcgatctggccgcccgcaccgtgcgcatcgaccgcttcgaactggtc
gaggaaccggatgccgaccatgcggtgttcgaagtggattgcggaaagggcacctatgtc
cgctcgctggcccgcgacctggcggaggcgctgggcacggtcggccatgtcgggcttctg
cgccgcctgcgcgtcggctccttcacgctggaccgcgcgatttccctggacgaactggcc
gccatggagcaaggtgcggccgtcgaacgacttctgttgccgatcgagaccgcgctggac
gacatcccggcgctggccctgacggaagcggaagcgcaccgactgaggcacggccagacg
gtggctctcctcacccggcaggatcgtgaccgcctgatggcggttcagggtgctgacggt
ggggatggcaccgtcattgcgcttttcggcggaacgccggtggcgttggcccgtgtcgag
ggggcggaggtccgtccggtgcgcgtgctcaacctcacgtga
DBGET
integrated database retrieval system
