Alicyclobacillus sp. SO9: GI364_07920
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Entry
GI364_07920 CDS
T10284
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alic Alicyclobacillus sp. SO9
Pathway
alic03030
DNA replication
alic03430
Mismatch repair
alic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GI364_07920
03430 Mismatch repair
GI364_07920
03440 Homologous recombination
GI364_07920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alic03032
]
GI364_07920
03400 DNA repair and recombination proteins [BR:
alic03400
]
GI364_07920
Enzymes [BR:
alic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GI364_07920
DNA replication proteins [BR:
alic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GI364_07920
DNA repair and recombination proteins [BR:
alic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GI364_07920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QQE80337
LinkDB
All DBs
Position
1751359..1754541
Genome browser
AA seq
1060 aa
AA seq
DB search
MKEREFVHLHCHSPYSFLDGASPIESLTAKAAMWGMSALALTDSNTIAGLPEFHKWAASY
GIKPISGSEVTLTDGTHLTLLAENKTGYTHLCQLLTLAHEGEDGRLDPKLSERDLFANSE
GLIVLSGCRKGRIAQHLLNYQPDAALAVAKKYQAVFPGSYFLELQGDAYPRTNWLNSQLA
ELSRHTHIPMAGTSNVHHVNPADSPVYDALKCISCDTDVYTPHPNRPLNTTRYLHSKEEA
YNRFAEYPEAVSSTQAIAQRCQVVLSLGASLFPKYKLPSKEFSAMDYFRRLVYNGAKQRY
GSLTNEIKERLEYEFSIILQLGYVDYFLVVWDIVRFARQNRIRCAGRGSAADSAVAYCLF
ITDVDAVGRNLLFERFMSLERAERPDIDIDFDSRRRDEVIDYVYRKYGRDYVARIATLQT
FRGRSAIREFGKALGVPQRILDVVAKRVPAMAHADDLAEMFDRIPEMQELKQYQKQLSWI
WKLAEKAAGFPRHFGMHVGGVVISSRPLYEVTSLQPSAKGEWMTPFDKHAVEDVGLVKLD
LLSLRTMSAIEDTIVQSERQGRAVDYDSIPLDDKATFAMIGRSDTVGVFQLESPAQRALQ
ARLESSGLEDLVASVALIRPGPIQGNMVDPFIRRRRGLEPISYLHPKLEPILAKTYGVVL
FQEQVIEIATVIAQFSPGEADELRRVMSKARTRAEMDRIGDRFLKKARQAGVDEAAADTI
FSYIKGYASYGFCEAHAAAFAATSYKTAYLSRHYPAEFFASILNQQPMGYYPVHVVCAAA
RQRGIAVIGPDINRSEWECTVKKNQIQLGFCLIKGIRQSLVQKIVSERQQHGGFESAPDC
ISRVHDLDRLSAEKLIRVGSFDGVSNVPRQSQLWELPHWFARRMNHLPLLRHESVQQKPL
EITSKAIIRNDRQKYRNTFDDAAKERQLLAGQLSDEYNLVGVGVSGHWLDLFRPHLKTEG
YAEAKDVIHCPDNAQIKLAGIVVRPHRPPTRSGRTTVFFTLEDETGFADATMFENVYQAT
GSIIFTPYGRLIGMEGTVQYRESQRPQLIVSRVWALTSDK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagagagagagtttgtccatcttcactgtcattcgccttactcttttctagacgga
gcttctcctattgaatccttaacagcaaaggctgctatgtggggaatgtctgcgttggcg
ttgacggatagcaatacaatagccggacttccagaatttcataaatgggctgcttcgtac
ggaattaaaccgatttccggatctgaagtgacgctgacagacgggacacatctgacgctc
cttgcagaaaacaagactgggtatacgcacctctgtcaattgttgactttggcgcatgaa
ggagaagacggccggttggacccaaaactgtcggagagagatttatttgcaaacagtgaa
ggcctgattgtgctgtccggctgcagaaaaggacggattgcacagcatttgttgaattat
caaccggatgcagcgttagccgttgctaaaaagtatcaggctgtttttccgggatcctat
tttttagagttacagggagatgcatatccgaggacaaactggttgaacagccaacttgcc
gagctcagcagacatacacacattccgatggcagggaccagcaatgttcaccatgtgaac
ccggctgattctccggtatacgatgcattgaagtgtatttcttgtgatacggacgtatat
acaccgcatcctaatcgtccgttaaatactacccgatatttgcattcaaaggaagaagcc
tacaaccggtttgctgaatatccagaggctgtttcaagtacacaggctatagcacagcgg
tgtcaggtggtgctgagcttaggagccagtttgttccctaagtataaacttccttctaaa
gaattttccgcaatggactacttccgccggctggtttataacggggcaaaacaacgttac
ggcagtttgacaaatgagataaaagagcgcttggagtatgagttcagtattattttacaa
cttggttatgtagattactttctagtggtctgggatattgtccggtttgccagacaaaac
cgtattcgttgtgcaggccgtggttcagcggcagattctgcggttgcatactgcctcttt
ataaccgatgtagatgctgtcggcagaaatttgctgtttgagcgtttcatgagtctggaa
cgggctgaacggccggatatcgacattgattttgacagccgcaggcgggatgaagtcata
gactatgtctaccgcaaatacggacgtgattatgtagcgagaatcgcaacacttcaaaca
ttccgcggacgctctgccatccgggagttcggcaaggccctaggtgtaccgcagaggatt
ttggacgtggtggcaaaacgggttcctgctatggcgcatgctgacgacttggccgaaatg
tttgaccgaattccggaaatgcaggagttgaaacagtatcaaaagcaattgtcgtggatt
tggaaactggctgagaaagcagccggttttccaagacattttggcatgcatgtaggtggg
gttgtcatcagttcccgtcccctgtatgaggtgacatcgctgcaaccgtccgcaaaaggg
gaatggatgaccccttttgacaaacacgcggttgaagatgttggactggtgaaactggat
ttattgtctttgcgcaccatgtcggccattgaagacaccattgttcaaagtgaacgccaa
ggcagggcagtggactacgatagcatcccgcttgacgacaaagctacttttgccatgatt
gggcgcagcgacaccgttggcgtttttcagttggagagtcctgcgcagagagcgctgcag
gcaaggcttgagtcaagtggactggaggatttggtagctagtgttgcgttgattcggccg
ggtcccattcaaggaaatatggtcgatccctttattcgtcgccgccgcggcctcgaaccg
atttcttacttgcatcccaaactggagcccatccttgcaaaaacctatggcgttgtttta
tttcaggagcaagtcatagaaatcgctacggtcattgctcagttttcacccggagaagcg
gatgaactgcgcagagtgatgagtaaggctcggacacgtgcagagatggatcgcattgga
gatagattcttgaaaaaagctagacaggcaggtgttgacgaagcagcagcagataccatt
ttctcgtatattaaaggttatgccagctatggtttttgtgaagcacatgccgctgctttt
gcagcgacttcctataaaactgcctatctgtccaggcattacccggctgaattttttgcc
tctattttaaaccagcagccaatgggctattatcctgttcatgttgtttgtgcagctgcc
agacaacggggcattgctgttattggcccagatatcaaccgcagtgaatgggaatgtacg
gtgaaaaagaatcaaattcagttaggcttttgtcttatcaaaggcatacgtcaatcactg
gtacaaaaaattgtttctgaacgacaacaacatggaggctttgagtcggcgccggactgt
atttcgcgcgttcatgacctagacagactatctgcagaaaaattgattcgagtcggtagt
tttgacggcgtttcaaatgttccccggcaaagccaactgtgggaactaccacactggttt
gcgcgcagaatgaaccatttgcctcttctaaggcatgaaagtgttcaacaaaaacctttg
gaaattacttcgaaagccatcattcggaatgacagacagaagtacagaaacacttttgat
gatgcggcaaaagagagacaactgcttgcaggacagttgtctgatgaatacaatctagta
ggtgtcggtgtgtcaggtcactggctggatttgttcagaccgcacctgaaaacggaagga
tatgctgaagcgaaagatgtcattcactgtcctgacaacgcacaaataaagttagcgggt
attgttgtacggccgcatcgaccgcccacgcgcagcggcagaacaacagtgttttttacg
ctggaagacgaaacaggctttgccgatgcaactatgtttgaaaatgtttatcaagctacg
ggatccattatatttacaccctatgggagattgattggcatggagggaactgtacagtac
cgggagagtcaacgtcctcaactgattgtgtcgcgagtctgggcattaacatcagataaa
taa
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