Alicyclobacillus sp. SO9: GI364_07970
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Entry
GI364_07970 CDS
T10284
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
alic Alicyclobacillus sp. SO9
Pathway
alic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GI364_07970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alic03400
]
GI364_07970
Enzymes [BR:
alic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GI364_07970
DNA repair and recombination proteins [BR:
alic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GI364_07970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
DUF1376
Motif
Other DBs
NCBI-ProteinID:
QQE80345
LinkDB
All DBs
Position
complement(1765643..1766506)
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AA seq
287 aa
AA seq
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MTEKSSQRVPDILLGANVSIAKTGLLAAVKETIEYDANTYMIYTRSNRGGKARPIEDFNR
DEAWELMKEHGIYDPVVHLSYLVNLASPKEETWQYGVDVLSEEIRRVEYLGLNYIVMHPG
SHVGEGEDYAIKRIADGLNRILSGDENLHLCLETMAGDGSKVGNSLEQISEIMNLVEHRD
KLGVCIDTCHNYSYGYDVVNDFDGFLKRFDEVIGLDKLKVAHINDSKNPFESRKDRHANI
GDGSLGLEAIKHIVHHEALRGKPQILETPGGKYRSEIDAILDRKPQE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaagtcgtcccaacgcgtgccggacatacttctcggcgccaacgtatccatt
gcaaagacaggattgctggcggccgtgaaagagaccatagagtacgatgcaaacacatat
atgatttatacccgcagtaaccgcggcggcaaagcccgccccattgaagattttaaccgc
gatgaagcatgggagttaatgaaggaacacggcatctacgatcccgttgttcacctttcc
tacctcgtcaacctggcaagtccgaaggaagagacttggcagtacggcgttgacgtcctc
tcggaagaaatcagacgagtcgaatacttgggattgaactatattgtcatgcatccgggc
agccatgtcggagaaggtgaagactacgccatcaagcgaattgcagatggcttaaatcgc
atcctcagcggagacgaaaacctgcacctgtgtcttgaaaccatggccggagacggttcc
aaagttggcaactcgttggaacaaatttctgaaattatgaatcttgtcgagcaccgtgac
aaacttggcgtctgcatcgacacttgccacaactacagttacggatacgatgtggtcaac
gacttcgatggatttctgaagcgatttgatgaagtgattggtttggacaagctcaaggtt
gcacacatcaatgattccaaaaacccgtttgaatcaagaaaagaccgacacgccaatatt
ggcgacggctcccttggtttggaagccatcaaacacattgtccaccacgaagcactccgt
gggaaaccccaaattctcgagactcccggcggcaagtaccgctcagagattgacgcaatt
ctggacaggaagccgcaagagtaa
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