Alicyclobacillus sp. SO9: GI364_09350
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Entry
GI364_09350 CDS
T10284
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
alic Alicyclobacillus sp. SO9
Brite
KEGG Orthology (KO) [BR:
alic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alic03000
]
GI364_09350
Transcription factors [BR:
alic03000
]
Prokaryotic type
Helix-turn-helix
Other families
GI364_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
Mg_chelatase
HTH_30
AAA_5
AAA_2
HTH_IclR
HTH_29
AAA
HTH_7
HTH_28
HTH_20
HTH_23
HTH_1
AAA_7
HVO_A0261_N
HTH_11
AAA_16
Mga
HTH_17
TrmB
Phage_NinH
HTH_50
HTH_22
HTH_Tnp_ISL3
HTH_Tnp_1
Xre-like-HTH
HTH_psq
DUF2089
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QQE80586
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Position
complement(2064616..2066577)
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AA seq
653 aa
AA seq
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MISKEVVASSWERSRKYGVKPDVNPDAILEQASFLHRREKHQTLLQTIGPSVLTLFTSLR
DIQSTAIVADVDGYILSSIGDPTFMSDAEKVHLREGACWSESIRGTNAIGTAIVEHNPVT
IVGEQHYCENNQFLCCSAVPLFHPSGEMAAVLDVSGYYEAFHPSQLALVEMAARNMEDWM
LLQNREYHLVLSLHSTAATTAAHRRRALIGIDLDGRIIGANREGRTMLQVTNLTERNLFL
QEVLRDSHLLLSSHRQDHTELLRFHKPLDNNEFVEASVVLENRPYRTAPFSSQPNQTRTS
ASESVQEAPGTPPNIPGRATNSLSSKTSKTSEPWQTRYRFQDIFAHDPSLLTAVDLARRA
ARTDYTVLVYGETGTGKEMVSQAVHRESQRKTYPFVSLNCGAMSPTLIESELFGYESGAF
TGAKNGGSKGKIELAHQGTLFLDEIAEMPPDMQTRMLRVLQEGYIVRIGGTKPIPVDVRI
IAATHKDLWSEVQTGHFRADLFFRLQGIEINLPPLRHRTDLLELIHYLLPKVQRELDLNA
LHLTGKAQQLLLSYSWPGNVRELESVLREAAFLAQSSTIETNHFPKRLQPSNLTLRPPAD
CVRHQKNSNGLRQYEHQMILQTLEESQGNLSEAARRLGISRSTLYRKLQDIEC
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgaaggaagtcgtagcatcttcatgggaacggagtcgaaagtacggagtaaag
ccggatgtcaatccagatgctattctcgaacaggcctcttttttgcaccgccgggagaaa
caccagacgctgcttcaaactattgggccgtcggtgctgaccctgtttaccagtcttcgg
gacatacagtccactgctatcgtcgcagacgtggacgggtacatactgagcagcattgga
gacccgacatttatgtctgatgctgaaaaagttcatctccgggagggggcgtgctggagc
gaatctatccgcggtaccaacgcaattggaacggccattgtggaacacaatcctgttacc
attgtcggtgagcagcactattgtgagaacaatcagtttttgtgctgctctgcggtacca
ttattccatccttctggagaaatggcagcggtactcgatgtgagcggttactatgaagca
ttccatccgtcacaactcgctttggtagagatggcggcaagaaatatggaagattggatg
cttttgcaaaatcgagagtatcacctggtgctgtctcttcattctacagccgcaactaca
gccgcacacagaagacgcgcactcattggcattgacttggatggtcgaatcatcggggcc
aatcgagaaggcagaactatgctgcaagtgactaacctgacagaacggaacttgtttttg
caagaagtgctgcgtgacagtcacctgctattatcatcacaccgtcaagaccacactgaa
ctgctgcgtttccataaaccgctggataacaacgagtttgttgaagcttcagttgtgttg
gagaacagaccgtatcggaccgcacccttctcgtctcaacccaaccaaacccgcacatca
gcctccgaatccgttcaagaggcacccgggacacctcctaatatacctggaagagccaca
aactcattgagttcgaagacatcaaagacgtctgagccgtggcagacacgctatcgtttt
caggacatttttgctcatgatccttcacttctgactgctgttgacctggcccgccgcgct
gcgcgtacagactacacggtgctggtctatggcgaaacgggtaccggtaaagaaatggtg
agtcaggccgttcatcgcgaaagtcagcgaaaaacatacccttttgtatcccttaactgt
ggtgccatgtctcccactctaatagaaagcgaattgtttggatatgaatccggagccttt
acgggggcaaagaacgggggcagcaaagggaagattgaattggcccaccagggaactctg
tttttggatgaaattgcggaaatgccgcctgatatgcagacaaggatgttgcgtgttctg
caagaaggctacattgtgcgaatcggaggaactaaaccaattccggtggacgtcagaatc
atcgcggcaactcataaggacctgtggagcgaggtacagaccggacactttcgggctgac
ctgttttttcggctgcagggaattgaaataaacctaccgcctttgcgtcatcggaccgat
ctattggaactgattcactatctgcttcccaaagtccagcgagaattggacttaaatgcc
cttcatctaactggaaaggcccagcagctgctcctctcgtactcgtggcctggaaacgtg
cgagagctggaatccgtactgcgtgaagctgcttttttggcacaaagcagcaccatcgaa
acaaatcattttccaaaaaggctccaaccatcgaatcttaccctgaggcctcctgcagac
tgtgtccggcatcagaagaactcaaatggacttcgccaatatgagcatcagatgattctt
cagacactggaagagtctcagggaaacctgtcagaggctgcccgtcgacttggcattagt
cggagcaccctgtaccgaaagctgcaagatatcgagtgctga
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