Alicyclobacillus sp. SO9: GI364_10660
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Entry
GI364_10660 CDS
T10284
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alic Alicyclobacillus sp. SO9
Brite
KEGG Orthology (KO) [BR:
alic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alic03032
]
GI364_10660 (topA)
03400 DNA repair and recombination proteins [BR:
alic03400
]
GI364_10660 (topA)
Enzymes [BR:
alic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GI364_10660 (topA)
DNA replication proteins [BR:
alic03032
]
Prokaryotic type
DNA Topoisomerases
GI364_10660 (topA)
DNA repair and recombination proteins [BR:
alic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GI364_10660 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Auto_anti-p27
DNA_ligase_ZBD
Toprim_4
Zn_ribbon_RPB9
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QQE80794
UniProt:
A0A7T5EXZ1
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All DBs
Position
2333012..2335138
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AA seq
708 aa
AA seq
DB search
MADYLVIVESPAKAKTIGKYLGKRYAVKASMGHVRDLPKSQLGVDVNQDFEPKYITIRGK
GDVIKTLKSATKKAKRVFLAADPDREGEAIAWHLANVLDLDETAPCRVVFHEITKDAVKD
AFKNPRQIHMDLVNAQQTRRILDRLVGYRLSPLLWKKVKKGLSAGRVQSVAVRLIVERER
EIKAFNPEEYWTVDAKFPLEKGSLTARFYGYNQEKTALPNQEAVTNLLDYAKGHQYSIEH
VKKSERKRNPSPPFTTSSLQQEAARKLGFRAYRTMSVAQQLYEGLDVGGGGGSVGLITYM
RTDSTRISDTAQSEARTYISEHYGNDYVPEKPKQYKTKGDAQDAHEGIRPTSVLRSPAEM
KSFLSKDQYRLYKLIWDRFVASQMSHALLDTTTIDIRVRDARFRATGSVLKFPGFMAIYT
EGKDDASEEEQSKLLPPVSEGQDLGEPEMTPEQHFTQPPPRFSESSLVKEMEERGIGRPS
TYAPTIDTILKRGYVVLDQKRFTPTELGEIVVDMLNEYFHELIDVDFTAHLEEELDAIEE
GQVDGDKVLKDFYGPFEEHLEQAEKSLEHVQIADEESDVECEKCGRMMVYKHGRYGKFLA
CPGFPECRNTKPIIKEVGVNCPDCGSPLVERKGKRRVFYGCSSYPECDYVLWQKPSGQYC
PVCQHPMVEKRSKGKVEIICSNENEHDKILQQENPKQAERENQTASRR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
ttggcagattatcttgtcatcgtggagtcaccagcaaaagcgaagacgattggcaagtac
ctcggaaaacggtacgcagtgaaagcctctatggggcacgtacgggatttgccaaagagt
caacttggcgtcgatgtgaatcaagactttgaacccaagtatattaccattcggggtaag
ggtgacgtcatcaagacgctgaaatcggcaacaaagaaagctaaacgcgtttttcttgcg
gctgaccctgaccgcgaaggcgaagccattgcgtggcacttggccaatgtattggatttg
gatgaaactgcgccttgtcgtgttgtatttcacgaaattacaaaagatgcggttaaggat
gctttcaagaaccctcgacaaatccacatggatttggtaaacgctcaacaaacccgaagg
atccttgacaggttggtcgggtatcgtctcagtcctttgttatggaaaaaagtcaagaaa
gggctttcggcagggcgcgttcagtctgttgccgttcggttaatcgttgagcgcgagcga
gagataaaggcattcaatcctgaggaatactggacggtagacgcaaagtttccgcttgag
aaagggagcctcacagctcgtttttacggatataatcaagaaaagactgctttgcccaat
caagaagctgttacaaatctgcttgactatgcaaaaggacatcaatacagcattgagcat
gtcaaaaagtctgaacgcaagcgcaatcctagtccgccatttacaacaagcagtttgcaa
caggaggctgcgcgtaaattgggtttccgggcttatcgaacgatgtctgttgcgcagcaa
ctctacgaaggactagacgttggaggcggcggcgggtcggttggcttaatcacgtatatg
cgtacagattcgactcgaatatctgatacggcgcaatcagaggctcgcacgtatattagt
gagcactatggcaacgactacgtgcctgaaaagccaaagcagtacaagacaaaaggtgac
gcccaggacgcccatgaaggaattcgtccgacttcagtattgcggtctcctgcagaaatg
aagtcatttctctccaaggatcaatatcgtttgtataaactcatctgggataggtttgtt
gcgagtcagatgagccacgcgttgctggatacgaccaccattgacatccgcgtccgcgat
gctcgctttcgtgccacgggttcagtgctgaagtttccaggattcatggcaatctatacg
gaaggcaaggacgacgcgtcagaagaggaacaaagcaagttactgccgcctgtttcagag
gggcaagaccttggtgagccggaaatgacacctgaacaacacttcacacagccgccgccg
agattctccgagtcaagtttggtgaaggaaatggaagaacggggaataggtcgacccagc
acgtatgcaccgactattgatacgattttaaagcgcggttacgtagtgttggatcaaaag
cgattcacacctacagaactgggcgaaattgttgttgatatgctaaacgagtattttcat
gaactgattgatgtggattttacagcccatcttgaagaagagctggatgctatagaggag
gggcaggtcgacggagacaaagttttaaaagacttttatggtccctttgaagagcatctg
gagcaggctgaaaaatcactggaacatgtacagattgctgacgaagaatctgacgtagag
tgcgaaaagtgcggcagaatgatggtatataaacatggtcgctacgggaaattcttagct
tgcccaggattccctgaatgtaggaacacaaagccgattatcaaggaagtgggtgtcaac
tgcccggactgcggaagtcccctagtcgagcggaaaggaaagcgccgcgtattctacggt
tgcagcagttaccctgagtgtgactatgtcctttggcagaagccgtctggacagtattgc
ccggtttgtcagcatccgatggtggaaaaacgttctaagggtaaagtggagattatttgc
agcaatgagaatgaacacgataaaatcctgcagcaggaaaatcctaagcaagctgagcga
gagaaccagacggcatcaaggagatga
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