Alicyclobacillus sp. SO9: GI364_10980
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Entry
GI364_10980 CDS
T10284
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alic Alicyclobacillus sp. SO9
Pathway
alic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GI364_10980 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alic03019
]
GI364_10980 (pnp)
03016 Transfer RNA biogenesis [BR:
alic03016
]
GI364_10980 (pnp)
Enzymes [BR:
alic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GI364_10980 (pnp)
Messenger RNA biogenesis [BR:
alic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GI364_10980 (pnp)
Transfer RNA biogenesis [BR:
alic03016
]
Prokaryotic type
tRNA degradation factors
GI364_10980 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
EXOSC1
SPATA25
Motif
Other DBs
NCBI-ProteinID:
QQE80851
LinkDB
All DBs
Position
2398622..2400721
Genome browser
AA seq
699 aa
AA seq
DB search
MVKRHEFMLAGRPVVLETGKLAKQATGAVSVRYGDTMVLATVTASKDPKDLDFFPLTVNY
EERFYAVGKIPGGFIKREGRPSERAILASRLIDRPIRPLFPEGFRNDVQVVDIVMSVDQD
CPPEMAAMMGTSAALTVSDIPFDGPIAGVIVGRVDGEFVINPTVEQTGKSDIHLTVAGTE
KAIVMVEAGADEVPEETMLEAILFGHETIKYIISEIRKFAEDAAVEKREVQLHQVDANLN
EAVRTHAAEAIKAAVRNPDKHSRDEAVAAVGAEAQAALAEQFPEQEAAIDEVLHDILKEE
VRRAIIHEGMRPDGRKLDEIRPISCEVDLLPRAHGSGLFTRGQTQALSVCTLGALGDEQM
LDGLGTEESNRYMHHYNFPPFSVGEARPLRAPSRRDIGHGALGERALDPVIPGPDKFPYA
IRVVSEVLESNGSTSQASICGSTMALMDAGVPIKAPVAGIAMGLVEEGGDVAVLTDIQGL
EDHLGDMDFKVAGTAAGVTALQMDIKIAGINREILERALTQAREGRLFILDKMMAAIGQP
RTELSQYAPKVIALEIKPDKIRDVIGPGGRVINKIIEETGVKIDIEQDGHVFISGVDAAM
ADKAKEQIMNITREVEVGVTYLGKVTRVEKYGAFVEVLPGKEGLVHISQLDENRVNKVED
ICKVGDQITVKVTEIDNQGRVNLSRKQALKSGANVHSKS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaagacacgaattcatgctggcgggcaggcctgtagtcctggaaacagggaag
ctcgcaaaacaagcaacaggagccgtatcagtgcgctatggagacacaatggtgctggca
acggtcaccgcttcaaaggacccgaaagaccttgatttctttcccttaaccgtgaattat
gaagagcggttttacgctgttggaaagattccaggcggttttatcaagcgtgaaggcaga
cccagcgaaagggcaattttggcgtcgaggctgattgaccgtccaattcgtccgctgttt
ccggaaggctttcgaaatgacgttcaggttgttgatattgtgatgtctgtcgaccaagat
tgtccaccggaaatggcggccatgatgggtacgtccgcagcgctgacagtctcagatatt
ccgtttgacggacccatcgccggagtgattgtcggtcgtgttgatggagagtttgtgatt
aatccaacggtggaacaaacgggaaagagcgacattcatttgactgttgcgggaactgaa
aaggcgattgtcatggttgaagcaggtgcggatgaagttcccgaagagacgatgcttgaa
gcgattttgttcggacacgagacaatcaagtacataatctctgaaattcgcaaatttgcg
gaagatgctgctgtggaaaagcgcgaagtccagcttcatcaggtggatgcaaatttaaac
gaggctgtgcgtactcatgcagcagaggccattaaagcagcggtcaggaatccggataag
cattctcgcgatgaagcagtggccgctgtcggtgcggaggcacaggcagcgttggctgaa
caattccccgaacaggaagcagcaatcgacgaggttttgcacgatatcttgaaagaagaa
gtgcggcgagccatcatccacgaaggcatgcgtccagacggacgtaaactggatgaaatc
aggccaatttcttgtgaagttgatttgttgccccgagctcacgggtcaggtttatttacc
cgcggtcagactcaggcactgtcagtatgcacgctcggtgctctcggtgacgaacagatg
ctggacggactcggcacggaagagtcaaaccgctacatgcaccattacaactttcctccg
ttcagcgtcggtgaagcccgtccgcttcgcgctccgagtcgccgcgatatcggccatggt
gcattaggagagcgcgcactggacccggttattcctggaccagataaatttccttatgca
attcgagtcgtttcagaagtgttagagtccaatggttcaacttctcaggcaagtatttgt
ggaagcactatggctcttatggatgcaggggtaccgattaaagcacctgtcgccggaatc
gcaatggggctggttgaagagggcggagatgtagcagttctcacggacattcaaggtttg
gaagaccatttgggcgatatggacttcaaagtggcgggaacggccgctggtgttactgct
ctgcagatggacatcaagattgcaggcattaaccgcgagattcttgaacgggctctgacg
caagccagagaaggccgcttgtttatcttggacaagatgatggctgcaattggccaaccg
cgtacggaattgtctcaatatgcaccaaaggtcattgctcttgaaattaaaccggataaa
atccgtgatgtcatcggacccgggggccgagttatcaataaaatcattgaagaaaccggc
gtgaaaattgacattgaacaagacggacatgtctttatctcaggcgtggatgcagccatg
gctgataaggcgaaggaacaaattatgaatattacgcgcgaagttgaagtgggcgtgacc
tacttaggaaaagtaacgcgggttgagaaatatggcgctttcgtagaagtccttcctgga
aaagaaggattagtgcatatctcccaattggatgagaatcgagtgaacaaggtcgaagac
atctgtaaagtaggagaccaaattacagtgaaggtaaccgagattgataaccagggccgt
gtcaacctttcacgcaaacaggctctgaaatctggggcaaacgtccacagtaagagctaa
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