Alicyclobacillus sp. SO9: GI364_11040 Help Entry GI364_11040       CDS       T10284                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism alic  Alicyclobacillus sp. SO9 Pathway alic03018   RNA degradation Brite KEGG Orthology (KO) [BR:alic00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     GI364_11040  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:alic03019]     GI364_11040 Messenger RNA biogenesis [BR:alic03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      GI364_11040 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 Polo_box_4 Motif Other DBs NCBI-ProteinID:  QQE80861 LinkDB All DBs Position 2412232..2413887 Genome browser AA seq 551 aa AA seqDB search MAKRKKLSIIPLGGVGEIGKNMTAYCYGNDIIVVDAGLKFPEEEMLGIDIVIPDISYLLE NKDKVRGIFLTHGHEDHIGGLPYVLKSLNVPVYGTKLTLGLVSGKLKEHGLSDTVQLNEI DSKSRIQVGSFTVSFFYVNHSIPDSGGFAINTPEGLVVHTGDFKVDHTPVDGRHADLNKL AEYGDKGVLALVADSTNAERPGFTPSERSVGKTIDDIVAKTDGRLILATFASNIHRLQQV ILSAEKYGRKVAVIGRSMVNNIQTAIDLGYLEIEPSTLIDPDDINKVPAEKLIILSTGSQ GEPMSALTRMARNAHRKVEIYPGDTVVLASSPIPGNELSISRTIDQLFRIGANVIYQGVH VSGHGSQEELKLMLNLVRPQYFVPVHGEFRMQRRHAMLAEETGVEPENVFILDLGDVLEF ENKEAHLGAKISAGMVMIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLGKTTGAILSGP DIISRGFVYVRESEALLEEASKLVENTLGKLVAENVSEWSSLKTAVRDTLGRFLYEQTRR RPMILPIIMEV NT seq 1656 nt NT seq  +upstreamnt  +downstreamnt ttggcaaagaggaagaaattatcaataattccactaggtggggttggcgagatcgggaaa aacatgaccgcctactgctacgggaatgacattattgttgtggatgcaggtctgaagttt ccagaagaagaaatgcttggcattgatatagtgataccggatatttcctatctgttggag aacaaagacaaggttcgcggcatctttctgacacatggtcatgaagaccatatcggggga ctgccatatgttctgaaaagcttgaacgtgccggtttacggcaccaagttgacgttgggt ctcgtttccggaaagctgaaggaacacggcttgtctgatacagtgcagttaaacgagatt gacagtaaatcgagaattcaggttggttcctttacggtgtcgtttttttacgttaatcac agcatcccggattctggcgggtttgcgattaatacgccggagggtctggtggtgcacacg ggtgacttcaaggtggaccatacgcctgttgacggtcgacacgcagatttaaacaaatta gccgaatatggggacaagggtgttcttgcactagttgccgacagtacgaatgcagaacgt cccgggtttacgccttctgaacgatccgttggcaaaaccattgatgacattgtcgcaaag acggacggccgccttattttggcaacatttgcgtcgaacattcacaggttgcaacaggtt atcctgtcggcggaaaagtatgggcgtaaagttgcggtcattggtcgcagcatggtgaat aacatccagacagccatcgatttagggtatttggaaattgagccaagcactttaatcgac cctgacgacatcaacaaggttccagctgaaaagctgattatcctttcaacgggatcgcaa ggcgaaccgatgtctgcgttgactcggatggcgagaaatgcgcaccggaaggtggagatt taccccggagacacagtggttttggcaagttcgccaatccccggaaatgaattgtcgatt tctcgcacaatcgatcaattattccggattggtgcaaacgtcatttatcaaggtgttcac gtatcgggtcacggcagccaggaagaactgaaactgatgctgaatttggtccgtcctcag tatttcgttccggttcacggtgaatttcgcatgcagcgcagacatgcaatgctggcagaa gaaaccggggttgagcctgagaacgtatttattctcgacttgggcgatgtcctggagttc gaaaataaggaggctcacctgggtgccaagatttcagccggtatggtgatgattgacggt ctgggtgtgggcgatgttggaaatatcgtcttgcgggatcggaagttattgtcacaggat ggcatcttggtagtcgttgtcactctagggaagacgaccggcgcgattctttccgggcca gacattatctctcgcggatttgtctatgttcgtgaatctgaagcgcttttggaagaggca agcaaacttgttgaaaatacccttggcaaactggttgctgaaaacgtcagtgagtggtca tccttgaagacagcggtcagagacaccctggggcgcttcttgtatgagcaaacgcgtcgg cggcctatgattctgccgattatcatggaagtttga

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