Alicyclobacillus sp. SO9: GI364_19285
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Entry
GI364_19285 CDS
T10284
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alic Alicyclobacillus sp. SO9
Pathway
alic03030
DNA replication
alic03430
Mismatch repair
alic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GI364_19285 (dnaE)
03430 Mismatch repair
GI364_19285 (dnaE)
03440 Homologous recombination
GI364_19285 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alic03032
]
GI364_19285 (dnaE)
03400 DNA repair and recombination proteins [BR:
alic03400
]
GI364_19285 (dnaE)
Enzymes [BR:
alic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GI364_19285 (dnaE)
DNA replication proteins [BR:
alic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GI364_19285 (dnaE)
DNA repair and recombination proteins [BR:
alic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GI364_19285 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QQE81416
UniProt:
A0A7T5EZ81
LinkDB
All DBs
Position
complement(4086082..4089195)
Genome browser
AA seq
1037 aa
AA seq
DB search
MSTFVHLHVHSEYSLRESTLRISQLVNQAVEHDAPAVAVTDRNGLYGAVKFYKAARKAGI
KPILGVQLSVCKDQDLDEAALGRPRGPQIDAAVLLAESLEGYRNLVKLVSLANTRHRNPV
VTLSEAASHRDGVIALIAGSESQIARSFAQQSAQTAREWLHDWHQIWRHSHLYIDVQDHG
MTSERQALRELLQWATEAQVPVVATNDVHYLYETDAGIQRTLSQLDNSLWNSPLQGNRHD
FASPAEMERRLGQIPNAIENTLRIAERCTVELPLGQAHMPKYPTSSGEPAAEVLTKAARV
GMLQRYGTETEELRDRLDYELEIINRLGFADYFLVVADFIRFAHKNGISTGPGRGSAAGS
LVAYSLRITDVDPLSNRLLFERFLNPERVNWPDIDTDFEYERRNEVIQYVLSRYGQERVA
QIGTFGTLAARAALRDVGRALQTDAKLVDRVAKLVPGVPGMTLKRARKEVQDLNDLLQAE
SRLKPLWEQALALEGLPRHTSVHAAGVVISPFVLSDLVPVQEGADGIPVTQYDMEDVEAL
GLVKMDFLGLRTLTLIDNTANSIKARTGKTLNWTRIPDGDKATFQMLGRGETEGCFQLES
AGVRRVLRDLRPTRLEDLIAVISLYRPGPMENIPTFIKARHGRIPVSYPHPDLEQILKDT
YGVIVYQEQIMQIAARMAGFSLGQADLLRRAVGKKKRDVLDAQRSAFVSGAVANGYDEET
ADQVYDLVVRFADYGYNRSHAAAYAVLSYRTAWLRANYLPDFLAALLSMTVGNAGKEAEY
KKDAKKHKIEVLSPSVQTSDVLYTVESKNVIRTGLLSVRNVGKSAVENIMEVRNNGQFTS
LVDFLQRINSRTCNRKAVESLLEAGALDDFLPASVSPEVKKSMLGEAYNEAAEGKQMAGL
GLQFDRGNQSANSARVEPVNGTVHPSGGQESSSPKPPNVLYIRYGPQPVKTPSAAPLKHA
STAAVKETILKKVRTMLTDAPGATRVVLYDSDKRKTRLLEERFSVELSPELIGALEEIVG
MGNVKIGRMPSTQTQEE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacgtttgtccatttgcatgttcacagcgagtattcccttcgcgagagtacactg
cgcatatcacaactggtgaatcaggcggtagagcatgatgcgcctgctgttgcggtgaca
gatagaaacggtttgtacggtgcagtgaaattttataaagcagcacgcaaggcaggtatc
aagcccatacttggtgtgcaattgtctgtttgtaaagaccaagatttagacgaagcagcc
cttgggcggccgcgtgggccgcaaattgatgcagccgtgttgctggcagaatcattggag
ggttaccgcaatttggtgaaactcgtatcgctggccaatacccggcatcgcaaccccgtt
gtaaccctgtccgaggcagccagtcacagagacggtgtgattgcattgattgcaggcagt
gagtctcagattgccaggagttttgcacagcagtcggcacaaactgcccgggagtggttg
cacgattggcatcaaatttggcggcacagccacctctatattgatgttcaagaccacggt
atgaccagcgaacggcaggctttacgcgagttgctgcagtgggcaactgaagcgcaggtt
cccgtcgtcgcaacgaatgatgtacattacctgtatgaaacagacgcaggtattcagcgg
actttgtcacagcttgacaacagcctgtggaacagtccacttcaaggaaaccgccatgac
tttgcaagccctgctgaaatggagcggcgcctgggtcagattccgaacgcaattgaaaat
acccttcgcattgcagagcgttgtactgttgaattgccccttgggcaagctcatatgccc
aaataccccacctctagcggtgaaccggctgcagaagtgttgaccaaggctgcgagagta
gggatgcttcagcgttacggtacggaaaccgaggaactcagagaccgtctggattatgaa
ctggagatcatcaatcgcctcggatttgccgattactttctggtggtggctgactttatt
cgatttgctcacaagaatggtatttcaacaggcccaggaaggggttctgctgcaggcagc
ttggtcgcatacagtcttcgcattactgatgtggatccgctgtcgaaccgacttctgttt
gaacgttttctcaatccagagcgcgtgaattggccggatatagatacggattttgaatat
gagcgacgcaacgaggtcattcagtacgttctctctcgctacggtcaagagcgggtcgca
cagattggtacgtttggaacactggcggccagagcggctttacgggatgtgggccgggcg
ttgcagacagatgcaaaactggtcgatcgcgttgcaaaactggtccccggtgtccccggc
atgaccttgaaacgggcacgaaaggaagtccaagatttaaatgatttgttgcaggcggag
tcacgactcaaacccttatgggagcaggcgctggctttggaaggtctgcctcgccacact
tctgttcatgccgccggcgttgttatttccccgtttgttctctctgatttggtgcccgtt
caagaaggcgctgacgggattcctgtaactcaatacgatatggaggatgtggaggcgctc
gggcttgtgaagatggattttctcggcctcaggaccctcactctcattgacaacaccgct
aacagtatcaaggctcgtacaggcaagacactcaattggacgcgcatacctgacggtgat
aaggcaacctttcaaatgctggggcgaggtgagaccgagggttgctttcagttggaatcg
gccggtgtgcggagagtattgcgtgatttgcggccaacccgactagaagacttgattgct
gttatttctctatacaggccggggccaatggagaatatccctactttcatcaaggctcgt
cacgggcgtattcccgtttcgtacccacatcctgatttggagcagattctgaaagacaca
tacggagtcattgtctatcaggaacaaatcatgcaaatagctgcgaggatggcagggttt
agccttgggcaggctgacctgctgagacgggccgtcggcaaaaagaaacgcgatgtgctc
gatgcacaaaggtctgcatttgtatctggggccgtggcaaacggctatgatgaagaaaca
gcagaccaagtctatgacttggtcgtacgatttgcagattacggctataaccggagccat
gcggcagcatatgccgtgttgtcgtatcgcacagcctggcttcgcgctaactacttgccg
gactttttggcagcgttgctgtcaatgactgttggcaacgctgggaaagaggcggaatac
aaaaaagatgccaagaaacataaaattgaagtcttgagtccttctgtacaaaccagcgac
gtactctatacggttgaatcgaaaaatgtgattcgaaccggacttttatctgtccgcaat
gtgggcaaaagtgcagtcgaaaacatcatggaagtccgaaacaacgggcaatttacatcc
ctggtcgactttctccaacgcatcaactctcgaacctgcaatcgtaaagcggtggaaagc
ttgcttgaggcaggggcgttagacgattttctgcccgccagtgtttctccggaggtgaaa
aaatccatgttgggcgaagcctacaatgaagccgcagaaggtaagcaaatggctggtctg
gggcttcagtttgaccgggggaatcaatctgcgaacagcgctagagtggagcctgtaaat
ggaactgtacatccatctggcgggcaggaatcttcgtcccccaagccgccgaacgtcttg
tacattcggtatggtccacagcctgtcaagaccccgtctgctgctcccttaaagcacgct
tcaaccgcggctgttaaggaaacaatcctgaaaaaagtccgtacaatgttaacagatgca
ccgggtgcaactcgagtggttctgtatgacagtgataagagaaaaacacgtctgcttgaa
gagcggttctccgtcgaactctctcctgaactcattggtgcactagaggaaatcgtgggt
atggggaatgtgaaaatcggtcggatgccctcgacgcaaacacaggaggaatag
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