Alicyclobacillus sp. SO9: GI364_21035
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Entry
GI364_21035 CDS
T10284
Name
(GenBank) ATP-binding domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alic Alicyclobacillus sp. SO9
Pathway
alic03420
Nucleotide excision repair
alic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GI364_21035
03430 Mismatch repair
GI364_21035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alic03400
]
GI364_21035
Enzymes [BR:
alic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GI364_21035
DNA repair and recombination proteins [BR:
alic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GI364_21035
MMR (mismatch excision repair)
Other MMR factors
GI364_21035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
Viral_helicase1
DEAD
SLFN-g3_helicase
AAA_30
NACHT
Motif
Other DBs
NCBI-ProteinID:
QQE78332
UniProt:
A0A7T5JSC6
LinkDB
All DBs
Position
complement(4463531..4465975)
Genome browser
AA seq
814 aa
AA seq
DB search
MDARDWQVEQERLRYVVEKVKGKIVALEPKVSGLAQQVTDIRKHFWEEVTVNTSTPEDFE
ETFYSINQQHAVLAERERGHGLLMKQWNDLNRLLPSPYFGRIDFHEDGLNATEQVYIGVS
SFIEEDGLDFLVYDWRTPIANMYYDGSPGAAFYDAPSGRISGKMELKRQYQIQNGQLLHM
FDASLTIGDELLQQVLGKGADPQMKSIVATIQREQNAIIRDVKSRMLIVQGAAGSGKTSA
ALQRVAFLLYKNRDTLNADQVILFSPNPIFNSYVSTVLPELGEENMQQATFQEYLEYELG
ASFALEDPFEQFEYEWTGRQTPGYEARLQGMKYKASEAFLNAINNYVLWLGCKGILFNSI
RFRNRELITEEQMKSKFYSYPTSLKLDNRVVLLQKWLLDELALLERQEMEAEWVQEELNY
LDNDEYADVFGELHKEREVFDIHEQFAVIQERIHKKRREDEGDFDFARREEELLRKKLVK
KRFQPLKRKVKKLKFVDVKGLYDQLFGDKASFEVMTNATDIPALWTDICKQTRCKLSRDE
LFYEDETPFLYLKELIEGVRTNTQIQYVVVDEGQDYSPFQYQYLKKLFPRARFTVLGDFR
QAIFVQATHLHQSDSSLLRLYGHDETRVMNLVRSYRSTREIVMFTKGLLCDGEEIVPFDR
GGKKPLLMRMSSRDKRDTQLLRDIASLRSEGFDSIAIITKSASESRKAYESLQTRGCDDL
MLTTKQTPTFEKGVMMIPVYLAKGVEFDAVIIYDASYQAYNRENERTLLYTACTRAMHRL
LLYSVGDWSPFVQAVGQNLYESTHEGRNEIEGQS
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagagattggcaagttgaacaagagcggctgcgctatgttgtggagaaagtc
aaagggaaaattgtcgcgttggaaccgaaggtgtccggtcttgcccaacaggtgacggac
atccgcaaacatttttgggaggaagtcacggttaacacaagcacccctgaagacttcgaa
gagaccttttattcaattaaccagcagcacgctgttttagcggaaagggagcgggggcac
gggctgttgatgaaacaatggaatgatttaaacagacttctcccatctccatatttcggg
cgcatcgacttccatgaggatggtctgaacgccacggagcaggtctacatcggcgtgtct
tcgtttattgaagaagatggattagatttcttggtctatgactggcgtactccaattgcc
aacatgtactacgatgggtctccgggtgccgctttttatgatgctccgtctggacgcatt
tctggaaagatggaattgaagcggcaatatcagattcaaaatggacagttgcttcatatg
tttgacgcaagcttaacgattggtgacgagttgttgcagcaagtgctgggaaaaggcgca
gatcctcaaatgaagagtattgttgctaccattcagagggagcaaaatgccattatccga
gatgtaaagagtcggatgctaatcgtgcagggtgccgccggcagcggcaagacatctgca
gcgttgcagcgtgtagcattcctactatacaagaaccgagataccctgaacgctgaccag
gtgattctcttttctcccaatcccattttcaacagttatgtatccactgtccttccggaa
cttggagaggagaacatgcagcaggcgacatttcaggaatacctcgaatacgagttgggt
gcatcgtttgcacttgaagaccccttcgaacagtttgaatatgaatggactgggcgacag
actcctggatatgaagctcgtcttcaaggtatgaagtacaaggcatcggaagcgttctta
aatgccatcaacaactatgtgttgtggctgggatgtaaaggcatcctgttcaacagcatt
cgatttaggaaccgtgaactcatcacggaggagcaaatgaaatcaaaattttacagctat
ccgacgtctttgaaattggacaatcgtgtcgtactgctacaaaagtggttgcttgatgag
ctcgctttgctcgaacgtcaggagatggaggcagagtgggttcaagaggaattgaattac
cttgacaatgacgaatatgcggacgtcttcggcgagttgcacaaggagagagaagtcttt
gacattcacgagcaatttgccgtaatacaagaaagaattcacaaaaaacggcgagaagac
gaaggtgattttgacttcgcccgtcgggaggaagaacttctccgcaaaaagctcgtaaag
aagcgtttccaacctctgaagcgaaaggtgaaaaaactcaagttcgttgacgtcaagggt
ctatacgatcagttgttcggcgacaaagcgagttttgaggtgatgacaaatgcgacggat
atccctgctctatggacagacatttgcaaacagacaagatgtaagctcagtcgagacgag
ttgttttatgaagacgaaaccccgtttttatacttaaaagaactgattgagggcgttcgg
acaaatacgcagatccagtatgtggttgtcgatgagggtcaggactattcaccgtttcaa
taccagtatcttaagaaactgtttcctcgtgctcgttttactgtactcggtgattttagg
caggcaatattcgttcaggctacgcatttgcaccaatcggactcctctttgctgcgactg
tatggtcatgatgaaacgagggtgatgaaccttgtacgcagctatcgttcgacccgagaa
atagtcatgttcacgaaaggcttactctgtgacggagaagagattgtcccctttgaccga
ggcggtaagaaacctcttctcatgcgtatgagcagtagagacaagcgagacacgcaatta
ttgagagatatcgcgtcgcttagatccgaaggatttgactctatcgcgattattacaaag
agcgcatcggaaagccgcaaggcttatgaatccctgcagacacgaggctgcgacgacctt
atgcttactacgaaacagacgcctacctttgaaaagggagtgatgatgattccggtatat
ctggcaaagggagttgaattcgacgcggtcattatctatgatgcgtcctatcaagcttac
aatcgggaaaacgagcgtacgcttctgtacactgcgtgtacgcgggcaatgcaccggctg
ctactgtactcagtaggggattggtcgccttttgtgcaggctgtaggtcagaacctgtac
gagtcgacacatgaaggacgtaacgagatagaaggccagtcataa
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