Alicyclobacillus sp. SO9: GI364_24365
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Entry
GI364_24365 CDS
T10284
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
alic Alicyclobacillus sp. SO9
Pathway
alic03018
RNA degradation
Brite
Enzymes [BR:
alic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GI364_24365
Messenger RNA biogenesis [BR:
alic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GI364_24365
Ribosome biogenesis [BR:
alic03009
]
Prokaryotic type
rRNA helicases
GI364_24365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QQE78926
UniProt:
A0A7T5EUA3
LinkDB
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Position
complement(5165990..5167513)
Genome browser
AA seq
507 aa
AA seq
DB search
MSGFSKYKLPAEVVAALTAQRITDPTPIQEQVIPVVLSGQDVIAQAQTGTGKTLAFVLPI
LQKVDPGNAVTQALVITPTRELAIQVATETKKLAKELETIHVLAVYGGQAVEQQARKLRR
SVHIAIGTPGRILDHVRRETLDLSKVSMLVLDEADQMLQMGFLEEVEAIIQQTRRSRQTM
LFSATLPQQIRLLAKRYLTKPADINVKGNQVAIETVRQRVVKSTESNKQSTLQRLLDEER
PYLAIIFCRTKRRVKALCEFLQKQGYEAEEIHGDLSQNVRERVIRKFRSAKTQLLVATDV
AARGLDVDGITHVFNYDMPPDAESYIHRIGRTGRAGDTGLAITLAAPSDGPGLASIERGL
RQTIEKQGPESETSNRASSKSGTSRRVSKKPDSRGMRDSATRKPKPMWKAKQKPTSKVRE
ESKAKQKPTLNAKVQSGPKSTANFEEKLDSRQKSKLESRSEPKQRHGFKAQAGRSQSRRQ
TEQTGQARRGRNRQAAGRRQGRPGSKV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaggtttctcaaaatataaactcccggcagaagtcgttgctgcgttaactgcgcag
cggattactgatccgactccgattcaagaacaggtgatacctgttgtgctatcgggacaa
gacgttattgcacaggcgcagacaggtactggtaagacgcttgcttttgtattgcccatt
cttcaaaaagtagatccaggcaatgctgtaactcaggcattggtgatcacacctactcga
gaactggctattcaggttgcaacggaaacgaagaaacttgctaaagagcttgagacgata
catgttttagcagtatacggcgggcaggcagtggaacaacaagcaagaaaattgagacgg
tccgtgcacattgcaattggaacgccaggcaggattttggaccatgtgcgccgagagaca
cttgatttatcaaaggtgtcaatgcttgtcctagatgaagcggatcaaatgcttcaaatg
ggctttcttgaagaagtagaagccattattcagcaaacgcgacggtctcggcaaaccatg
ctcttctctgccacactgccacagcaaatccgcttgctcgcaaaacgttatttaacgaaa
cccgcagacatcaacgtcaaagggaatcaagttgcaatcgagacagtgagacaacgagtt
gttaaatccactgaaagcaacaagcaaagcacacttcagcgtttgcttgatgaggaaaga
ccttatttagcgattattttctgcagaacaaagcgccgggtcaaggcactctgtgaattt
ctacagaaacagggatatgaagctgaggaaattcatggggatctctctcaaaatgttcgg
gagcgcgtcatcagaaagttcaggagtgcaaaaactcaactgctagtggcaacggatgtg
gcagcgagggggcttgatgtcgacgggatcacgcacgtattcaactatgacatgccacct
gatgcagagagttacattcatcgaattggtcgaacgggccgggccggagacactggactg
gctatcactttggctgcaccttccgacggccctgggctggcgtctattgaaagaggtctg
cgacagacaatcgaaaagcagggacctgaaagtgagacttcaaatagagcgtcttctaaa
tcaggaacttcgagacgcgtaagtaagaaaccggacagcagaggtatgcgggatagtgcg
acaaggaagccaaagccgatgtggaaggcaaagcaaaagccaacgtcgaaggtaagggaa
gagtcaaaggcaaagcaaaagccaacgttaaatgcaaaggtacagtcgggtccaaagtcg
acggcaaatttcgaggaaaagttggattcaaggcaaaagtccaaattggagtcaaggtcg
gaaccgaagcaacgacacggttttaaggcacaagctgggaggagccagtctaggcggcag
acagagcaaacgggccaggcgagacgaggtagaaatcgtcaagctgcgggccgtcgacaa
ggcagacctgggtcaaaggtgtaa
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