Actinobacillus lignieresii: NCTC10568_00288
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Entry
NCTC10568_00288 CDS
T06678
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
alig
Actinobacillus lignieresii
Pathway
alig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10568_00288 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alig03019
]
NCTC10568_00288 (groEL)
03110 Chaperones and folding catalysts [BR:
alig03110
]
NCTC10568_00288 (groEL)
03029 Mitochondrial biogenesis [BR:
alig03029
]
NCTC10568_00288 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alig04147
]
NCTC10568_00288 (groEL)
Enzymes [BR:
alig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NCTC10568_00288 (groEL)
Messenger RNA biogenesis [BR:
alig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NCTC10568_00288 (groEL)
Chaperones and folding catalysts [BR:
alig03110
]
Heat shock proteins
HSP60 / Chaperonin
NCTC10568_00288 (groEL)
Mitochondrial biogenesis [BR:
alig03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NCTC10568_00288 (groEL)
Exosome [BR:
alig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NCTC10568_00288 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
NCTC10568_00288 (groEL)
Exosomal proteins of breast cancer cells
NCTC10568_00288 (groEL)
Exosomal proteins of colorectal cancer cells
NCTC10568_00288 (groEL)
Exosomal proteins of bladder cancer cells
NCTC10568_00288 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
VEB25580
LinkDB
All DBs
Position
1:297250..298893
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVVAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDG
TGLDDALDVVEGMQFDRGYLSPYFINKPEAGTVELENPYIILVDKKISNIREILPVLEAV
AKAGKPLLIVAEDIEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATLEELGQAKRVVITKDNTTIIDGIGDEAQIKARVAQIRQQIEDSTSDY
DKEKLQERVAKLAGGVAVIKVGAATEVAMKEKKDRVDDALHATRAAVEEGIVPGGGVALV
RAASKVAATLTGDNEEQNVGIKLALRAMEAPLRQIVTNAGEEASVVARNVKDGNGNYGYN
AGTEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMITDLPKEEKLDPAAAMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgttaaattcggtaatgacgcacgtgtaaaaatgttaaaaggcgtg
aatattttagcggatgcggtaaaagtaactttaggcccgaaaggtcgtaatgtcgtatta
gataaagcatacggcgcaccaaccatcactaaagacggcgtgtcggttgcacgtgaaatc
gaattggaagataaattcgaaaatatgggcgcacaaatggtaaaagaagtggcgtcaaaa
gcgaacgatgcggcaggtgacggtacgacaaccgcaactgttcttgcgcaagcaatcgta
aacgaaggcttaaaagcagtagcggcaggtatgaacccgatggatttaaaacgcggtatc
gataaagcggttgttgctgtagtggaagaattaaaagcgatttctaaaccgtgcgaaact
tcaaaagaaattgagcaagtaggcactatttcagcaaactctgatgaaactgtaggtaaa
ttaattgcgcaagcaatggaaaaagtcggtaaagaaggcgttatcactgttgaagacggt
acaggtttagatgatgcgttagatgtggtagaaggtatgcaatttgaccgtggttacctt
tctccatactttatcaataaaccggaagccggtacggttgaattagaaaacccatacatt
attttagtcgataaaaaaatcagcaacattcgtgaaatcttaccggtattagaagcggta
gcaaaagcaggtaaaccgttattaatcgtagcggaagatatcgaaggcgaagcgttagca
acattagttgtgaatacaatgcgcggtatcgtgaaagtggctgcagtaaaagcaccgggc
tttggcgatcgtcgtaaagcaatgttacaagatattgcaatcttaaccgcaggtaccgtg
atttcggaagaaatcggtatggaacttgagaaagcgacacttgaagaattaggtcaagca
aaacgtgttgtgattactaaagacaatacaaccattattgacggtatcggtgacgaagcg
caaatcaaagcacgtgtagcacaaattcgccaacaaattgaagattcaacatcagattac
gataaagagaaacttcaagagcgtgttgcgaaattagccggcggtgttgcggtaattaaa
gttggtgcggcaaccgaagtggcgatgaaagagaaaaaagatcgtgttgatgatgcgtta
cacgcaactcgtgcggcagttgaagaaggtatcgtaccgggaggcggtgttgcattagtg
cgtgcggcttctaaagttgcggctactttaacaggtgataacgaagagcaaaatgtcggt
atcaaacttgcgcttcgtgcgatggaagcaccgcttcgccaaatcgtgactaacgcaggc
gaagaagcgtccgttgtggctcgtaatgtgaaagacggtaacggtaactacggttataat
gccggtacggaacaatacggcgatatgcttgagatgggtatcttagatccgacaaaagta
actcgttcggcattacaattcgcagcatcaattgcaggtttaatgatcacgacagaatgt
atgatcacagatttaccgaaagaggaaaaattagatccggctgcagcaatgggcggcatg
ggtggtatgggcggaatgatgtaa
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