Actinobacillus lignieresii: NCTC10568_00537
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Entry
NCTC10568_00537 CDS
T06678
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
alig
Actinobacillus lignieresii
Pathway
alig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC10568_00537 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alig03400
]
NCTC10568_00537 (xseA)
Enzymes [BR:
alig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCTC10568_00537 (xseA)
DNA repair and recombination proteins [BR:
alig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC10568_00537 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
CLZ
Motif
Other DBs
NCBI-ProteinID:
VEB25824
LinkDB
All DBs
Position
1:complement(558691..560244)
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AA seq
517 aa
AA seq
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MYLQKITENLPLAPYLLLPVNFPKIFGNFLDMNNILTITQLNYSVRNLLETELGQVWLTG
EISNFSQPVSGHWYLTLKDENAQVRGAMFRMKNQRVTFRPQNGMQVLVRASVSLYEPRGD
YQIIIESMQPAGDGLLQQQFEQLKMKLAAAGLFAQEKKKTIPPFAKRVGIITSSSGAALQ
DILNILKRRDPSLAIIIYPTLVQGKEATQYIVNTIDLANRRRECDVLIVGRGGGSLEDLW
CFNEEAVAHAIFRSDIPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRDQQELVRQL
QHQFDKLSLAFDRLWTEKQTYFERLKLRLNAQHPVRQVQMQQQRLAQFSYRLESAIHKTY
LTEKQKLEQLLLRVTNQHPQHQLQQQQLQLKQAEYRLAQAIEQTLIRKQNQWKHITEQVK
RNPLPHYVEKKTQQYAQLAQQLQFAIEKKLTKEQQKFQELCTKIDGLSPLKILARGYSVT
QTSKGEILRSTENLKVGTQITTKLSQGEIVSEIIKIN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgtatttgcaaaaaataactgaaaatttaccgcttgcaccttatcttcttttaccagta
aactttcctaaaatcttcggcaactttctagatatgaataatattcttaccatcacgcaa
cttaactattcggtacgcaatctgcttgaaacggaattagggcaagtttggctcaccggt
gaaatttctaatttcagtcagcccgtttccggacattggtatctcacccttaaagacgaa
aacgcccaagtgcgtggtgcgatgttcagaatgaaaaaccaacgagtcactttccgtccg
caaaacggtatgcaagtgctggtacgtgcgagtgtcagtttatatgagccgcgtggcgac
tatcaaatcattattgaaagtatgcagcctgccggtgacggtttgttacagcaacaattt
gaacaattaaaaatgaaactggccgccgcagggctttttgcacaagaaaagaaaaaaacc
attccgccttttgctaagcgagtcggtattattacctcttcaagcggtgcggcattacag
gatattctgaatattttaaaacgccgtgacccgagtttggcaatcattatttatccgact
ctagtacaaggtaaagaagcgacgcaatatattgtaaatacgattgatttagccaatcgc
cgccgagaatgcgatgtgttaattgtcggtcgtggcggcggttcgctagaggacttatgg
tgttttaatgaagaagctgtcgctcacgccattttccgttcggatattccgattattagt
gcagtaggacacgaaaccgatgtgacgattgccgattttgttgcagatttaagagcgccg
actccctctgccgcagcagaattggttagccgagatcaacaagagttagtacgtcagtta
caacatcaatttgacaaattaagccttgcttttgaccgcttgtggacggagaaacaaaca
tatttcgaacgtttaaaactacgtttaaatgcgcagcaccctgtccgccaagtacagatg
caacaacaacgattagcccaatttagttatcgtttagaaagtgcgatacataaaacttat
ttaaccgaaaagcaaaaactcgaacaattgttgctacgcgtaaccaatcagcatccgcaa
caccagttacaacagcaacaattgcaattaaaacaagcagaatatcgtctggcgcaagcg
atagaacaaaccttaatccgcaaacaaaaccagtggaaacatattaccgaacaagtgaag
cgtaatcccttaccacattacgtagaaaagaaaactcagcaatatgctcaactcgcacaa
cagctgcaatttgcgattgaaaagaaattaaccaaagaacagcaaaaattccaagagctt
tgcacgaaaatagacggtttaagcccgctaaaaattttagcgagaggctattccgtgaca
caaacctctaaaggcgaaatcttgcgttcaaccgaaaatcttaaggtaggcacgcaaatt
accactaaactttcgcaaggcgaaatcgtgagtgaaatcattaaaatcaattga
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