Actinobacillus lignieresii: NCTC10568_00543
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Entry
NCTC10568_00543 CDS
T06678
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
alig
Actinobacillus lignieresii
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alig03019
]
NCTC10568_00543 (cafA)
03009 Ribosome biogenesis [BR:
alig03009
]
NCTC10568_00543 (cafA)
Messenger RNA biogenesis [BR:
alig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10568_00543 (cafA)
Ribosome biogenesis [BR:
alig03009
]
Prokaryotic type
rRNA processing factors
NCTC10568_00543 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
CjCas9_WED-like
Motif
Other DBs
NCBI-ProteinID:
VEB25829
LinkDB
All DBs
Position
1:565367..566842
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AA seq
491 aa
AA seq
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MSGAELLVNVTPSETRVALVENGLLKELHIEREAKRGIVGNIYKGRVTRVLPGMQSAFVD
IGLEKAAFLHASDIVSHTECVDENEKKQFVVKDIAELVREGQDIIVQVVKDPISTKGARL
TTDITLPSRYLVFMPENSHVGVSQRIESEEERNRLKTLVEPYCDELGGFIVRTAAEEVSE
ESLQQDTIFLKRLWRKILERKAKYPVKSMLYGELALAQRVLRDFVGTHISSIRIDSKMTY
EQVKEFLAEFMPELTENVSLYSGSQTLFDAYGVEEAIQKALDKRVDLKSGGYLIIEQTEA
MTTIDINTGAFVGHRNLAHTIFNTNIEATQAIAHQLQLRNLGGIIIIDFIDMQEEEHRER
VLQSLQEALKGDRVKTNVNGFTQLGLVEMTRKRTRESLERVLCCDCPACKGRGTIKTIET
VCYEILREIVRVHHLFKTEKVRVYAAKDVAEYLINEETHASIAELEAFIGKTIEIKLEPY
YHQDQFDVVVM
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgcagaattattagtaaacgtgacgccgagtgagactcgggtggcgttagtt
gagaacggattgttaaaggagcttcatattgagcgtgaggcgaaacgagggattgtcgga
aatatttataaagggcgcgtgacacgagtgttgccgggaatgcagtcggcatttgtcgat
atcggtttggaaaaagccgcatttttacacgcttccgatattgtttcgcatacggaatgt
gtcgatgaaaacgagaagaaacagtttgtcgtaaaagatattgccgagttagtgcgtgaa
gggcaggatattatcgtacaagtggtgaaagacccgattagtaccaaaggcgcacgttta
actaccgatattactttgccttctcgctatttggtgtttatgccggaaaatagtcacgtg
ggtgtttcgcagcgtattgaaagtgaggaagaacgtaatcgtttaaaaacattggttgag
ccttattgtgatgaacttggtggctttattgtacgcacagcagcggaagaagtttcggaa
gaaagtttgcaacaagatacgattttcttgaaacgtttatggcgtaaaattttagaacgc
aaggcaaaatatccggttaaatcaatgttatacggtgagcttgctttagcacagcgtgtc
ttacgtgattttgttggcacgcatatcagttcgattcgcattgactcaaaaatgacttat
gaacaagttaaagagtttttggcggagtttatgccggaattgaccgaaaacgtaagttta
tatagcggtagccaaacattatttgatgcttacggtgtagaagaggcgattcaaaaagcg
ttggataaacgggtggatttaaaatcaggcggttatttaattattgaacaaaccgaagcg
atgaccacgattgatattaataccggtgcgtttgtcggtcatcgtaatttagcgcatacg
atttttaatactaatatcgaagcgacccaagcgattgcacatcagttacagttgcgtaat
ttaggcggcattatcattattgattttattgatatgcaagaagaagagcatcgtgagcgt
gtgttacagtcgttacaagaagcgttaaaaggcgaccgagtgaagaccaatgtgaacggc
tttacccagcttggcttagtagaaatgacccgtaaacgtacccgtgaaagtttagaacga
gtgttgtgttgcgattgtccggcgtgtaaagggcgtggtacgattaaaacgattgaaacc
gtttgttatgaaattctgcgtgagattgtgcgtgttcatcatttgtttaaaaccgaaaaa
gtgcgtgtttatgctgcaaaagatgtggcggaatatttgattaacgaagaaacgcacgct
tcgattgccgaactcgaagcctttatcggtaaaaccatcgaaatcaaattagagccttac
tatcatcaagatcaatttgatgttgtcgtgatgtaa
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