Actinobacillus lignieresii: NCTC10568_00578
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Entry
NCTC10568_00578 CDS
T06678
Symbol
msbA
Name
(GenBank) lipid transporter ATP-binding/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
alig
Actinobacillus lignieresii
Pathway
alig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC10568_00578 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alig02000
]
NCTC10568_00578 (msbA)
Enzymes [BR:
alig01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NCTC10568_00578 (msbA)
Transporters [BR:
alig02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NCTC10568_00578 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
RsgA_GTPase
DEAD
nSTAND3
SbcC_Walker_B
APS_kinase
AAA_30
MMR_HSR1
AAA_29
AAA_18
AAA_24
ABC_membrane_2
AAA_25
AAA_15
ABC_ATPase
AAA_5
AAA_23
Motif
Other DBs
NCBI-ProteinID:
VEB25862
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All DBs
Position
1:602219..603967
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AA seq
582 aa
AA seq
DB search
MQEKDLSTFKTFKRLFPTIRPYKLGLIAGAIALVLNALVDSSLIYLLKPLLDDGFGKADS
SFLKLMAVLVVVFILIRGITNYIASYSLAWVSGNVVMTLRRNIFQHLMYMPVSYFDKNPT
GRLLSRVTYDTEMVATSSSHALVTIVREGAYLISLFVVMIYTSWQLSLVLFVMAPIIGVL
IGIVSKRFRTLSRNIQSSMGELTVTTEQMLKGHKVVLSFGGQKVEKDRFDRVSNDMRRKG
MKIVSADGISDGAVQLIASFALSVVLYVATFPEVMSENLTAGSFTVVFSSMMAMLRPLKS
LTNVNSQFQRGMAACQTLFEFLDLETEKDSGKREVERAKGDVVFNHVSFSYDGKDERALS
NISFNIPQGKTVALVGRSGSGKSTIANLLTRFYDIDQGEILLDGVNINDYTLANLRKQCS
VVSQQVHLFNDSIANNIAYAATDKYSREQIVEAARAAHALEFIEKLEHGFDTVIGENGAS
LSGGQRQRLAIARALLRNSPVLVLDEATSALDTESERAIQSALEELQKDKTVLVIAHRLS
TIEKADEILVVDHGEIIERGSHNELLAKNGAYKQLHSLQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaagatctctctacatttaaaacgtttaagcgtttgtttccgactattcga
ccgtataaattgggattgattgccggagctatcgcgcttgtattaaatgccttagtcgat
tcaagtttgatttatttactgaagccgttgctggatgacggtttcggtaaggcggatagc
agctttttaaaattgatggcggtattggtcgtcgtctttattttaattagagggatcacc
aactatattgccagttatagcctcgcatgggtatcgggcaatgtggtaatgacattgcgc
cgtaatatttttcagcacttaatgtatatgccggtcagttatttcgataaaaatccgacc
ggtcgtttgctctcccgtgtaacttatgatacggaaatggtggcgacttcttcatctcac
gccttggttacgattgtgcgagaaggcgcatatttgatttccttatttgtggtaatgatt
tataccagttggcagctatcattggttttatttgtgatggcaccgattatcggtgtctta
atcggcatcgtttcaaagcgttttcgtacgttaagtcgtaatattcaaagttcgatgggc
gaattgaccgtcactaccgaacaaatgcttaaagggcataaagtcgtgctttctttcggc
ggacaaaaagtcgagaaagatcgttttgatcgcgtcagtaacgatatgcgtcgtaaaggg
atgaaaatcgtttcggcggacggtatttcggacggtgcggtacaattaatcgcttcgttc
gcattatcggtggtactttatgtggctacctttccggaagtgatgagtgaaaatttaacc
gccggttcgtttaccgtggtgttttcgtcaatgatggcaatgctccgtccgttaaaatcg
cttacaaacgtgaactcgcaatttcaacgcggtatggcggcctgccaaacgttatttgaa
tttttagatcttgaaaccgaaaaagacagtggaaaacgtgaagtcgagcgagctaaaggc
gatgttgtgtttaatcatgtctcatttagctatgacggaaaagatgaacgagctttaagt
aatatttcctttaatattccacaaggtaaaaccgttgcgttagtcggtcgttctggttcg
ggtaaatccacaattgcgaatttgctcacccgtttttatgatattgatcaaggcgagatt
ttattagacggcgttaatattaacgattacaccttggcaaatcttcgtaagcaatgttcc
gtcgtttcacagcaggtgcatttatttaatgattcgatagccaataacattgcttatgcc
gctacggataaatatagccgagaacaaattgtagaagcggcgagagcggctcatgcgtta
gagtttattgagaaactggaacacggttttgatactgttatcggtgaaaacggtgctagc
ttatccggcggtcagcgtcagcgtttagccattgcgcgtgcgttattacgtaattcgccg
gtgttagtcttggacgaagcgacatccgccttggataccgaatccgagcgagcgattcaa
tcggcattagaggagttgcaaaaagataagacggtactggtgatcgcccatcgtttatcg
acgattgaaaaagcggatgagattctcgttgtagatcacggagaaatcattgaaagagga
tcgcataacgagttactggctaaaaacggtgcctataaacaattgcatagtttgcaattc
gggcaataa
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