Actinobacillus lignieresii: NCTC10568_00816
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Entry
NCTC10568_00816 CDS
T06678
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alig
Actinobacillus lignieresii
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alig03016
]
NCTC10568_00816 (truB)
Enzymes [BR:
alig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC10568_00816 (truB)
Transfer RNA biogenesis [BR:
alig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC10568_00816 (truB)
Prokaryotic type
NCTC10568_00816 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
VEB26092
LinkDB
All DBs
Position
1:complement(810967..811884)
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AA seq
305 aa
AA seq
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MSRPRKKGRDVHGVFLLDKPQGMSSNDILQKVKRLFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYQVTAKLGERTDTSDAEGQVVETRAVNVGEAEIITALEQFRGDIL
QVPTMFSALKHNGKPLYEYARQGITVEREARPITIFELRFIEYVAPYLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTVLRRLAVANYPIEAMMSYADLQNLSENQPLEELDKYLLPLDT
AVESLPKLNLTAEQTKAVGFGQRVKFENNDQIYGQVRLFSDNMQFLGVAEITTDNVIRPS
RMVNI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagacctcgtaaaaaagggcgtgatgttcacggcgtatttttattagataaaccg
caaggaatgtcgtcaaacgatattctgcaaaaggttaaacgcctgtttcaagcgaataaa
gcggggcataccggcgcattagatccgcttgcgaccggtatgctgccgatttgtttgggt
gaagcgactaaattttcgcaatttttgcttgattcggacaaacgttatcaagttactgca
aaattaggtgaacgtaccgatacgtcggacgcagaagggcaagtcgttgaaacccgtgcg
gtgaacgtaggtgaagcggaaattattacggcattggagcaatttcgcggcgatatttta
caagtgccgactatgttttccgcattaaaacataacggtaaaccgctctatgaatatgct
cgccaaggcattacggtagaaagagaagcgcgcccgattacgattttcgaattgcgtttt
atcgaatatgtcgcaccttatcttacgttagaggtacattgctcgaaaggcacttatatt
cgtactttagtcgatgatttaggcgaagtattgggctgtggcgcgcacgtgacggttcta
cgccgtttagcggtggcaaattatccgattgaagcgatgatgagctatgcggatttgcaa
aatttaagtgaaaaccaaccgcttgaagaattagataaatatcttttacctttagatacc
gcagtagaaagcctaccgaaactaaacttaaccgcagagcagactaaggcggtcggtttc
ggtcaaagagtgaaatttgaaaataacgatcaaatttacggacaagttcgtttgttttcg
gataatatgcaatttctcggtgtcgcggaaattacgaccgataatgtcattcgcccaagc
agaatggtaaatatttaa
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