Actinobacillus lignieresii: NCTC10568_00978
Help
Entry
NCTC10568_00978 CDS
T06678
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
alig
Actinobacillus lignieresii
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alig03400
]
NCTC10568_00978
DNA repair and recombination proteins [BR:
alig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NCTC10568_00978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_16
ResIII
FtsK_SpoIIIE
AAA_10
CbiA
TrwB_AAD_bind
SLFN-g3_helicase
AAA_30
T2SSE
AAA_7
P-loop_TraG
Zeta_toxin
AAA_19
AAA_6
AAA_5
Hydrolase
nSTAND3
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
VEB26251
LinkDB
All DBs
Position
1:complement(956671..958170)
Genome browser
AA seq
499 aa
AA seq
DB search
MAQYALAQTKTGQIISLNSKMANRHGLIAGATGTGKTVTLRKFAEAFSDDGVPVFLVDVK
GDLSGLAQAGSLSGKIAERVEQFQLGGESYLSGYPVSYWDVFGETGIPLRTTISEMGPML
LSRLLNLNDTQEGLLNLVFRVADDRGLLLIDLKDLRALLKFVAENAKEFQVEYGNVSAAS
VGAIQRALLALENEGATNLFGEPALNLQDWMQTRDGKGVINVLNSEKLINSPRMYGAFLL
WFMAELFETLPEVGDPEKPKFVLFFDEAHLLFDDAPKVLVDKIEQVVRLIRSKGVGVYFV
TQNPLDLPDSVLGQLGNRVQHALRAFTPRDQKAVKSAAETFRANKGVDVVEAITQLGVGE
ALISVLDEKGMPTPVEVAYIYPPKSQLPPLAAAERDALVKQDDLYAYYSQYVDNESAYEL
LNAQVAQAQAVQRQAEAEKAEEENDFFGGMIASIFGTKKKKDQSVAEQVVSEVTKSVAKK
LTNQVSKQIMRGILGAITK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatacgcactcgcccaaacgaaaacagggcaaattatttcattaaattccaaa
atggcaaaccgtcacggcttaattgccggtgcgaccggtacgggtaaaacggtaacatta
cgtaaattcgcagaagcattcagtgatgacggcgtgccggttttcttggtcgatgtaaaa
ggcgatctttcggggcttgcacaagcgggcagtttatccggcaaaattgcggaacgtgtc
gaacaattccaattaggcggagaaagctatttaagcggttatccggtttcttattgggac
gtgttcggcgaaacggggattccgcttcgtaccacgatttcggaaatgggaccgatgttg
ctttctcgtttgctcaatttaaacgacacgcaagaaggcttattaaacctagttttccgt
gtggcggacgatcgcggtttattgctcatcgacttaaaagatctacgtgcattactgaaa
tttgtggcggaaaacgctaaagaattccaagtggaatacggtaatgtttcggcagcgagt
gtcggtgcgattcaacgtgcgttattggctcttgaaaacgaaggggcaacgaatttattc
ggtgaaccggcattaaatttacaagattggatgcaaacccgtgatggcaaaggcgtgatt
aatgtgcttaattcagagaagttaattaattcgcctcgtatgtacggtgcgtttttattg
tggtttatggcggaattgttcgagactctaccggaagtcggtgatccggaaaaaccgaaa
tttgtgctgttctttgatgaagcgcatttattgtttgacgatgcgccgaaagtgttggtg
gacaaaatcgaacaggtggtgcgtttaattcgttcgaaaggagtaggcgtatattttgta
acgcagaacccgttagatttgccggattcggtattaggtcagttaggtaatcgtgtacag
cacgctttacgtgcttttacgccgcgtgatcaaaaagcggtgaaatcggcagcggaaacc
ttccgtgccaataaaggcgtggacgtggtggaagcgattactcaacttggtgtgggtgaa
gcgttaatttcggtattagatgaaaaaggtatgccgacaccggtggaagtggcatatatc
tatccgccgaaaagtcagttacctccgttagccgcagcagagcgtgatgcgttagtcaaa
caagatgatttgtatgcttattacagtcagtatgtggataacgaatcggcgtacgaatta
ttgaatgcgcaagttgctcaagctcaagcggttcaacgacaagccgaagcagagaaagcg
gaagaagaaaatgatttcttcggtggtatgattgcttcgattttcggtacgaaaaagaaa
aaagatcaaagcgttgccgagcaagtggtaagtgaagtgacgaaatcggtagcgaaaaag
ctgaccaatcaagtttctaaacagattatgcgtggaatcttaggcgcgattactaagtaa
DBGET
integrated database retrieval system
