KEGG   Actinobacillus lignieresii: NCTC10568_01240
Entry
NCTC10568_01240   CDS       T06678                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
alig  Actinobacillus lignieresii
Brite
KEGG Orthology (KO) [BR:alig00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:alig02048]
    NCTC10568_01240 (hsdR)
Enzymes [BR:alig01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NCTC10568_01240 (hsdR)
Prokaryotic defense system [BR:alig02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NCTC10568_01240 (hsdR)
SSDB
Motif
Pfam: T1R_D3-like SWI2_SNF2 EcoR124_C HSDR_N ResIII DEAD V-SNARE_C
Other DBs
NCBI-ProteinID: VEB26507
LinkDB
Position
1:complement(1229892..1232777)
AA seq 961 aa
MIETTPITETNKFIVLDKYERLEQGSSYQTESDLERELIADLQNQGYEYRTDLNSQEALL
QNVRKQLETLNNVQFLDSEWQRFVAEYLDKPSENIIDKTRKIHYDHIYDFVFDNGRIQNI
YLVNKKRISRNKVQVINQFEQSGTHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQIH
RYSKESFNSEHSLFKFLQIFVISNGTDTRYFANTTKRDKNSFDFTMNWARSDNTLIKDLK
DFTATFFQKNTLLNVLLTYSVFDVSDMLLIMRPYQIAATERILWKIRSSSLANNWCSTES
GGYVWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNGS
DSTAGLKSNIEKDDNKIIVTTIQKLNNLMKSEDKLAIYQQPVVFIFDECHRSQFGEAQKN
LHKKFKKFCQFGFTGTPIFPENALGTETTASVFGRELHSYVITDAIRDEKVLKFKVDYND
VRPKFRDIETEQNLDKLTALETKEALLHPERIKEITQYILSHFKQKTHRLNATGKGFNAM
FAVSSVEAAKHYYEQFKLQQQAVEKPLKVATIFSFATNEEQNAIGEIEDEGFEPTAMNSS
AKEFLELAIKDYNQMFRTNFGVDSKAFQNYYRDLAKRVKNQEVDLLIVVGMFLTGFDAPT
LNTLFVDKNLRYHGLMQAFSRTNRIFDATKTFGNIVTFRDLEQATIDAITLFGDTNTRNV
VLERSYQDYMHGYEDSSGKSHRGYLEVVKELQEKFPEPNNLKTEEDKKAFTKLFSEYLRL
ENVLQNYDEFHELVKSGQDNQVCETPATYGSNAVETLTERQVQDYRSAYNDIRDWQRRER
NSDESKSSVDWSDVIFEVDLLKSQEINLDYILELIFEHNKKIKNKDELVDEVRRMIRSSI
GNRAKERLVVDFIHQTDLNSIPDKASVIDAFFQFAQKRAKKRSRRSDSIRKIKRRSCKTL
Y
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgattgaaaccacccccattaccgaaaccaataaatttatcgttttagataaatacgag
cgattagagcaaggctcaagctaccaaaccgaaagcgatttggaacgtgaattgattgcc
gatttacaaaatcaaggctatgaatatcgtaccgatttaaatagccaagaggcgttatta
caaaatgtaagaaaacaattagaaacgcttaataatgtgcaatttttggattcagaatgg
caacgttttgtggcggagtatttggataagccatctgaaaatattattgataaaactcgt
aaaatccattacgaccatatttatgattttgtgtttgataatgggcggattcaaaacatt
tatttggtgaataaaaaacgcatttctcgcaataaagtgcaggttattaaccaatttgag
caaagcggtacgcacgctaatcgctatgacgttactattttggtcaatggtttgccattg
gtgcagattgagctgaaaaagcgtggcgtggcaattcgtgaagcctttaatcaaattcat
cgttatagtaaagagagctttaattctgaacattcattatttaaatttttgcagattttt
gtgatttcaaacggtacggatacacgttattttgccaacacgactaagcgtgataaaaat
agctttgatttcacaatgaattgggcgagatcggataatacgttaattaaagatctgaaa
gattttactgccacatttttccaaaaaaataccttgctcaatgtgttgctaacctattcg
gtgtttgatgtcagtgatatgcttttgattatgcgtccctatcaaattgcggcaacggaa
cgtattttatggaaaatccgtagttcatctttggcgaataattggtgtagcacggaaagt
ggcggttatgtttggcacacgacaggatcaggaaaaacgctgaccagctttaaggcggct
cgccttgctactgaattagattttattgataaagtatttttcgtggtggatagaaaagat
ttggactatcagacgatgaaagaataccaacgcttttcgcctgatagtgtgaatggttcg
gacagtactgcagggttaaaaagtaacattgaaaaagatgacaataaaattatcgtaacc
accattcaaaaattaaataacttgatgaaaagtgaagataaattggcgatttatcaacag
ccagttgtctttatttttgatgaatgccaccgctcacagtttggcgaagctcagaaaaat
ttacataagaaattcaaaaaattctgccagtttggttttacaggcacgccaatttttcct
gaaaatgcgttaggaactgaaacaaccgcgagtgtgtttgggcgagagttgcattcttat
gtgattaccgatgcgattcgagatgaaaaagtgctgaaatttaaggttgattataatgat
gttcgcccgaaattccgtgatattgaaactgagcaaaatcttgataaattaaccgcactt
gaaaccaaagaagcgttattgcacccagaacgtattaaggaaattacccaatatattttg
agtcatttcaagcaaaaaacacaccgcttgaatgctacgggtaaaggctttaatgcaatg
tttgcggtaagtagcgtggaggctgcaaaacattattacgagcaattcaaactgcaacag
caagcggtcgaaaaaccgttaaaagttgcaacgattttctcttttgcgacaaatgaagag
caaaatgcgattggtgaaattgaagatgaaggctttgaaccaacggcaatgaacagttcg
gcaaaagaatttttggaacttgcgatcaaggattataaccaaatgttccgcactaatttt
ggcgtggatagcaaagcgtttcaaaattactaccgtgatttagccaagcgagttaagaat
caagaggttgatttgctcattgtggtaggaatgtttctgactggttttgatgctccaaca
ctaaacactctatttgtagataaaaacttgcgttatcacggtttgatgcaggcgttttct
cgcactaatcgtatttttgatgcaacaaaaacatttggtaacattgtgactttccgtgat
ttggagcaagcaaccattgatgcgattactttatttggtgatacaaatacacgtaatgtt
gtgcttgagcgtagctatcaagattatatgcacggctatgaagattcttcgggtaagagt
catagagggtatttagaagtcgtcaaagagctacaagaaaaatttccggaaccgaataat
cttaaaacagaagaagataagaaggcatttactaagttatttagtgagtatttacgctta
gaaaatgtgttacaaaattatgatgagttccacgagttagttaaatcaggacaagataat
caggtttgtgaaacaccagctacttatggtagcaatgcagtagaaacacttacggagcgc
caagttcaagattatcgttcagcttataatgatattcgagattggcaacgacgtgagcgt
aatagtgacgaatcaaaatcttctgttgattggagcgatgttattttcgaggttgattta
ctaaaatcacaagaaattaacctagattatattcttgaactgatttttgaacataataag
aaaatcaagaataaagatgagttggttgatgaagttcgccgaatgattcgttcaagtatt
gggaatcgagcgaaagaacgtttggtggtagattttattcatcaaacagatctgaacagt
atccctgataaagcaagcgtgatagacgcctttttccaatttgcccaaaaaagagcaaag
aagagaagcagaagatctgattcaatccgaaaaattaaacgaagaagctgcaaaacgtta
tattag

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