Actinobacillus lignieresii: NCTC10568_01362
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Entry
NCTC10568_01362 CDS
T06678
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease subunit B
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
alig
Actinobacillus lignieresii
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
alig03110
]
NCTC10568_01362 (clpB)
Chaperones and folding catalysts [BR:
alig03110
]
Heat shock proteins
HSP100
NCTC10568_01362 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
ATPase_2
nSTAND3
AAA_18
RuvB_N
AAA_24
TniB
bpMoxR
AAA_7
NBD_SMAX1
IstB_IS21
NACHT
DUF815
AAA_25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
VEB26624
LinkDB
All DBs
Position
1:1354183..1356756
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AA seq
857 aa
AA seq
DB search
MNFEKFTTKLQEALAEAQSLAIGKDNNYIEPAHLLYALVKQPDGSIAPLFTALNVQPQRI
LSELEAILNRLPTVSGGTTQPSQQLIRLLNQCDKLAQQFGDSFISSELFVLAALDDNGDL
GKLLKQFGLTKEKVNAAISQIRGGENVNNQNAEETRQALQKYTIDLTERAKAGKLDPVIG
RDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDM
GALIAGAKYRGEFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPS
LARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHH
VQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQL
KLERQALQKEEDEASRQRLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENA
RIEMDQARRESNFEKMSELQYGKIPALEKQLAEAVKREEEGGENQLLRTKVTDEEIAEVL
SKATGIPVSKMMEGEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGS
FLFLGPTGVGKTELCKTLANFLFDDSDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSHLIQENAYKGYDVVKTMVMEVVGQHFRPEFINRIDETVMFHSLGQEHIRAIARIQLQR
LIARLAERGYGVTVTDAALDHIGKAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPN
SPVVVDYQNDRLSISNS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgaaaaatttactaccaaattgcaagaagcccttgcagaagcacaatcgtta
gctatcggaaaagataataactatattgaaccggcacatttactttatgcgttagtcaaa
caaccggacggctctatcgcccctctatttactgcactcaatgtacaaccgcaacgtatt
ttgagtgaattagaagcgattttaaaccgcttaccgaccgtatccggcggtacgactcaa
ccgtcacagcaactgattcgcctgttaaatcaatgcgataaactggcgcagcaattcggt
gacagctttatttcatcggaattattcgtacttgccgcactggacgataacggcgattta
ggtaaattattaaaacaatttggcttaaccaaagaaaaagtaaacgcagcaattagccaa
attcgaggaggagaaaacgtgaataatcaaaacgcagaagaaactagacaagcccttcaa
aaatatactatcgatcttaccgaaagagccaaagccggtaaattagatccggttatcgga
cgtgatgaagaaatccgccgtgcggtacaagttttacaacgtcgtactaaaaacaatccg
gtcttaatcggtgaaccgggcgttggtaaaacggcaattgtagaaggcttggcacagcgt
attgtaaacggcgaagtaccggaaggcttaaaaaataaacgagtgctttctcttgatatg
ggcgcattaattgccggtgcaaaatatcgtggcgaatttgaagaacgtttaaaagcggta
cttaatgagttagccaaagaagaaggtcaggttatcttatttattgatgaaattcacacc
atggtcggtgcgggtaaaacagacggcgcaatggatgccggtaacttactcaagccgtca
cttgctcgcggcgaattacattgcgttggcgcaaccacattagatgaataccgccaatat
atcgaaaaagatgcggcacttgaacgtcgtttccaaaaagtattagtggacgaaccgacc
gttgaggatacgattgcgattttacgtggcttgaaagaacgttatgaaatccaccaccac
gtacaaattaccgacccggcaatcgtagcagcggcaactctctcacatcgctatatttcc
gaccgccaattaccggataaagcgatcgatttaattgacgaagcggcatccagtttacgt
atggaaattgattctaaacctgagccgttggataaacttgaacgccgtatcattcagctt
aaattggaacgccaagcgttacaaaaagaggaagatgaagcaagtcgccaacgtcttgca
aaattagatgaagaattgaccgctcgtgagcgtgaatattccgaattggaagaagtgtgg
aaagcggaaaaatctgcgctactcggtacgcaacatatcaaaaccgagttagaaaatgcc
cgtatcgaaatggatcaggctcgccgtgaaagtaatttcgagaaaatgtccgaattgcaa
tacggcaaaattccggcattagaaaaacaacttgcggaagcggtaaaacgtgaggaagaa
ggcggtgaaaatcaactccttcgtaccaaagtaaccgatgaagaaattgcagaagtgctt
tcaaaagcgaccggtattccggtatccaaaatgatggaaggcgaaaaagaaaaactgttg
cgtatggaagaagtattacacagccgtgtcatcgggcaaaatgaagcggttgaagcggta
gcaaatgcaattcgccgtagccgtgccggattgtctgatccgaatcgtccgattggttcg
ttcttgttccttggcccgaccggagtcggtaaaaccgaactttgcaaaaccttggcgaat
ttcctcttcgatgattctgatgcgatggtacgtatcgatatgtcggaatttatggaaaaa
cacagcgtttctcgtttagtcggcgcacctccgggctatgttggttacgaagaaggcggt
tacttaaccgaagcggttcgtcgccgtccgtattcggtagtgttactcgatgaagtggaa
aaagctcatccggacgtgtttaatatcttgctgcaagtgttggatgacggtcgtttaact
gacgggcaaggtcgtaccgtggatttccgcaatacggtggtgattatgacctcaaactta
ggttcgcatttaatccaagaaaatgcttataaaggatatgatgttgttaaaacgatggtg
atggaagttgtcggtcagcatttccgtccggagtttattaaccgtattgatgaaaccgtt
atgttccattcattaggtcaagaacatattcgtgcgattgctcgtattcaattacaacgt
ttaatcgctcgccttgcggaacgtggttacggagtaacggttaccgatgcggcattagac
catatcggcaaagcgggctttgacccgttattcggtgcaagaccgctcaaacgtgcaatt
cagcaagagcttgaaaatccgcttgcacaacagatcttaagcggcaaattattaccgaac
agcccagttgtggtggactatcaaaatgaccgattaagcattagcaacagctaa
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