Actinobacillus lignieresii: NCTC10568_01378
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Entry
NCTC10568_01378 CDS
T06678
Symbol
dnaE_2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alig
Actinobacillus lignieresii
Pathway
alig03030
DNA replication
alig03430
Mismatch repair
alig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10568_01378 (dnaE_2)
03430 Mismatch repair
NCTC10568_01378 (dnaE_2)
03440 Homologous recombination
NCTC10568_01378 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alig03032
]
NCTC10568_01378 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
alig03400
]
NCTC10568_01378 (dnaE_2)
Enzymes [BR:
alig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10568_01378 (dnaE_2)
DNA replication proteins [BR:
alig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10568_01378 (dnaE_2)
DNA repair and recombination proteins [BR:
alig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10568_01378 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_finger
HHH_6
DNA_pol3_alpha
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
VEB26640
LinkDB
All DBs
Position
1:1371742..1373817
Genome browser
AA seq
691 aa
AA seq
DB search
MTLAKAFDAEPKLPELYEADEEVKDLIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPL
YCDSEGLHPVTHFDKNDVEYAGLVKFDFLGLRTLTIIKWALEMINQRLAREGKEPVRIES
IPLDDKKSFDLLLASKTTAVFQLESRGMKDLISRLKPDCFEDIIALVALFRPGPLESGMV
QNFIDRKHGHEEVSYPDAQYQHESLKPILDPTYGVIVYQEQVMQIAQVLAGYTLGGADLL
RRAMGKKKPEEMAAQREIFEKGAIKQGIDGNLAMKIFDLVEKFAGYGFNKSHSAAYALVS
YQTLWLKAHYPAEFMAAVMTSEMDNTDKIVGFYDECINMGLTVVPPDVNSGKHRFSVNEK
GEIVYGLGAIKGVGEGPVEAILEAREKDGIFKDLFDLTARVDLKKINRRTFEGLIMSGAF
DKLGPHRAALMKNLEDALKASDQHSKMEALGQSDMFGVLTETPEEVQNAYANTPKWSEQT
ILEGERTTLGLYLSGHPVGQFLKELSHYAPVRLNELQPTRRGQVVTVAGIIMGSRIAVTK
RGSRLGIATIEDRSGKLDMTLFSEALETYGHLLEKDRIVIATGSVQFDDFSGGLKMSVRE
IATLDEARSRYAKSLALAVSQEQLTPQFVKELREIIEPNKEGTLPLHFYYQSPEGRALLR
SGVEWRVTPKDEMLDQLKALLGENAVELEFE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaccttggcaaaagcgtttgatgccgagccgaagctgccggaactttacgaagccgat
gaagaagtgaaagacttgattgatatggcacgtaaattagaaggtgtgacccgaaatgcc
ggtaaacacgccggtggtgtggtaatcgccccaacagcaattaccgatttctcaccactt
tattgcgattcggaagggttacatccggtgactcatttcgataaaaacgatgtggaatat
gccggtttagtaaaatttgacttcttaggcttacggacactcaccattattaaatgggcg
ttggagatgattaaccagcgtttagctcgagaaggcaaagagccggtacgtatcgaaagt
attccgttggatgataagaaatccttcgatctgttacttgcatctaaaacaacggcggta
ttccagctagagtcacgcgggatgaaagatttgatttcacgtctgaagcccgactgtttt
gaagatattatcgcattagtggcattattccgccccggtccgcttgaatccggcatggta
caaaactttatcgaccgtaaacatggtcatgaggaagtttcttaccctgatgcacaatat
cagcacgaatcgcttaaaccgattttagatccgacttacggcgttattgtttaccaagaa
caggtaatgcaaatcgcacaggtgcttgccggctataccttaggcggcgcggacttatta
cgccgtgcaatgggtaagaaaaaaccggaggaaatggcggcacagcgtgaaatcttcgaa
aaaggggcaatcaaacaaggtattgatggtaatcttgcgatgaaaatctttgacctggtg
gaaaaattcgccggttatggttttaacaaatcgcactctgccgcttatgcgttggtttct
taccaaacattatggctgaaagcacactacccagctgaatttatggcggcggtaatgact
tcggagatggataataccgacaaaatcgttggcttttatgacgaatgtatcaatatgggc
ttaaccgttgttccgcctgatgtaaacagcggtaaacaccgtttttcggtgaacgaaaaa
ggcgagattgtttatggcttaggcgcaattaaaggcgtgggtgaaggcccggttgaagca
attttagaagcccgtgaaaaagacggtatcttcaaagatttatttgatttgaccgctcga
gtcgatctgaaaaaaatcaatcgccgtacctttgaaggcttaattatgtcgggcgctttc
gataaattaggtccgcatcgtgccgcactgatgaaaaatttagaagatgcactgaaagca
tctgatcaacatagcaaaatggaggcattggggcaaagcgatatgttcggtgtgctaact
gaaacgccggaagaagtgcaaaatgcctatgcaaatacgccgaaatggtcggaacaaacc
attttggaaggtgaacgcactacgctcggtttatatttaagcggtcacccagtcggacaa
ttcttaaaagagttatcgcactatgcaccggtacgcctaaatgaactacagcctacacgc
cgtgggcaagtagttaccgttgccggtattattatgggttcacgtattgccgtaaccaaa
cgaggcagccgtcttgggattgctaccattgaagatcgttccggtaaattagatatgaca
ctattctcggaagcactcgaaacttacggtcatcttttagagaaagatcgtattgtgatc
gctaccggttcggtgcaattcgatgattttagcggcgggttaaaaatgtcggtgcgagaa
atcgccacgttagatgaagctcgtagccgctatgcgaaaagccttgctttagcggttagc
caagaacagctcactccgcaatttgtaaaagaattacgagaaatcatcgaaccgaataaa
gaagggacgttaccgttacatttctactaccaaagtcctgaaggcagagccttattgcgt
agcggcgtagaatggcgagtaaccccgaaagatgaaatgctcgaccaacttaaagctcta
ctcggtgaaaatgccgtagaactggagttcgagtaa
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