Actinobacillus lignieresii: NCTC10568_01998
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Entry
NCTC10568_01998 CDS
T06678
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
alig
Actinobacillus lignieresii
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alig03009
]
NCTC10568_01998 (rimO)
Enzymes [BR:
alig01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NCTC10568_01998 (rimO)
Ribosome biogenesis [BR:
alig03009
]
Prokaryotic type
ribosomal protein modification factors
NCTC10568_01998 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
NTPase_1
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
VEB27218
LinkDB
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Position
1:complement(1958912..1960243)
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AA seq
443 aa
AA seq
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MSTTPNIGFISLGCPKNLVDSERILTELRTDGYNIIPSYENADLVIVNTCGFIDSAVQES
LEAIGEALEENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEAVMKHVHKYVPRPERN
IYTSLVPAQGVKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLDSRPIVQVLDEAKRLAD
SGVKELLIVSQDTSAYALDQSKENQNKTVFWNGAPIKNNLITLCEQLGSLGIWVRLHYVY
PYPHVDDLIPLMAQGKILPYLDIPLQHASPKVLKAMKRPGAIDRTLERIKKWREICPELT
LRSTFIVGFPGETEEDFQMLLDFLEEAQLDRVGCFKFSPVEGAVATEMADQVPEDVKEER
FHRFMQVQQRISAARLQQKVGKTLAVIIDEIDEEGIIGRSMADAPEIDGVVYVDNLSEQE
VKVGQVISVSITNADEYDLWGTC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtactacacctaatattggttttattagtcttggctgtccgaagaatttagtcgat
tcggaacgtattctgactgaattacgtacagacggttataacatcattccaagttatgaa
aatgcggatttagtcattgtaaatacctgcggctttattgatagtgcggtgcaggagtcg
ttagaagcgatcggcgaagcattggaagaaaacggtaaagtgattgtaaccggctgttta
ggggcgaaagaaaaccaaattcgtgaagtacatccgaaagttttggagattaccggccct
cacagttatgaagcggtaatgaaacacgtacataaatacgtaccgcgtccggaacgtaat
atttataccagtcttgtgccggcgcaaggggttaaacttactcctaaacattacgcctat
ttaaaaatttcggaaggttgcgaccatcgttgtaccttctgtattattccatcaatgcgc
ggcgatttagatagccgtccgattgtgcaagtgttagatgaagcaaaacgccttgccgat
tcgggcgtaaaagagttactcatcgtttctcaagatacttccgcttatgcgctggatcag
tcaaaagaaaatcaaaataaaacggttttctggaacggtgcgccgattaaaaataatctt
atcactttatgtgagcagttaggctcgctaggtatttgggttcgcctacattatgtctat
ccgtatccgcacgtggacgacttaattccgcttatggcgcaaggtaaaattctgccgtat
ttggatattccgttacagcacgccagcccgaaagtgctgaaagcgatgaaacgccccggc
gctatagatcgtactttggaacgtataaaaaaatggcgtgagatttgtccggaattaacc
ttacgttcaacctttattgtcggcttcccgggagaaacggaagaagatttccaaatgtta
ttggatttcttggaagaagcccagttagatcgcgtcggctgcttcaaatttagcccagta
gaaggggcggttgcaaccgaaatggcggatcaagtgccggaagacgtgaaagaagaacgc
ttccatcgctttatgcaagttcaacaacgtatttccgctgcccgtttacaacaaaaagtg
ggtaaaacgcttgcagtcattattgatgaaattgacgaagaaggtattatcggtcgttca
atggcggatgcgccggaaattgacggcgtagtctatgtcgataacctttccgagcaagaa
gtgaaagtcggtcaagtgatttcggtaagcattaccaatgcggacgaatatgatctttgg
ggaacttgttaa
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