Actinobacillus lignieresii: NCTC10568_02082
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Entry
NCTC10568_02082 CDS
T06678
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
alig
Actinobacillus lignieresii
Pathway
alig00541
Biosynthesis of various nucleotide sugars
alig01100
Metabolic pathways
alig01250
Biosynthesis of nucleotide sugars
Module
alig_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC10568_02082 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
alig01005
]
NCTC10568_02082 (rfaD)
Enzymes [BR:
alig01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NCTC10568_02082 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
alig01005
]
Core region
NCTC10568_02082 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
VEB27297
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Position
1:complement(2038423..2039349)
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AA seq
308 aa
AA seq
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MIIVTGGFGMIGSNIVKALNEIGRKDILVVDNLKNGEKFVNLVDLDIADYCDKEDFIASI
IAGDDFGDIDAVFHEGACSATTEWDGKYLMHNNYEYSKELLHFCLDRQIPFFYASSAATY
GGRSDNFIEERKFEQPLNAYGYSKFLFDEYVRQVLPEADSPVCGFKYFNVYGPREQHKGS
MASVAFHLNNQMLKGENPKLFEGSETFLRDFVYVEDVAKVNIWAWQNGISGIYNLGTGKA
ESFQAVAQAVIDFHGKGEIEKIPFPDHLKSRYQTFTQADLTKLRAAGYTGTFKTVAEGTK
EYMAWLNR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaacaggcggctttggtatgatcggtagcaatatcgtcaaagcattaaat
gaaatcggcagaaaagatattcttgttgtagataacttaaaaaacggcgaaaaattcgta
aatttagtggatttagatattgcggattattgtgataaagaagactttatcgcctctatc
attgccggcgatgatttcggcgatattgatgcggtattccacgaaggtgcttgctcggca
accaccgaatgggacggcaaatacttaatgcacaataactacgaatattcaaaagagtta
ttacatttctgtttagatcgccaaattccgttcttctacgcatcaagtgcggcaacttac
ggcggtcgttcggataactttattgaagagcgtaaatttgaacagccgctcaatgcttac
ggctattcaaaattcctatttgacgaatatgtacgccaagttttaccggaagcggattcg
ccggtatgcggttttaaatatttcaacgtgtacggcccgcgtgaacagcacaaaggctca
atggcaagcgtagcgttccacttaaacaatcaaatgttgaaaggcgaaaacccgaaatta
ttcgagggatcagaaaccttcttacgtgatttcgtgtatgtggaagacgtagcgaaagtg
aatatttgggcgtggcaaaacggtatttctggtatttacaacctcggaaccggcaaagcg
gaatcatttcaagcggtagcacaagcggtgatcgacttccacggcaaaggcgaaatcgaa
aaaatcccattcccggatcacttaaaatctcgctaccaaaccttcacccaagcggatcta
accaaactccgtgcggcaggctacacaggcacattcaaaaccgtagccgaaggtacaaaa
gaatatatggcgtggttaaatcgttaa
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