Actinobacillus lignieresii: NCTC10568_02097
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Entry
NCTC10568_02097 CDS
T06678
Symbol
rpoC_1
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
alig
Actinobacillus lignieresii
Pathway
alig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10568_02097 (rpoC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alig03021
]
NCTC10568_02097 (rpoC_1)
03400 DNA repair and recombination proteins [BR:
alig03400
]
NCTC10568_02097 (rpoC_1)
Enzymes [BR:
alig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10568_02097 (rpoC_1)
Transcription machinery [BR:
alig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10568_02097 (rpoC_1)
DNA repair and recombination proteins [BR:
alig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10568_02097 (rpoC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-ProteinID:
VEB27312
LinkDB
All DBs
Position
1:2055401..2056555
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AA seq
384 aa
AA seq
DB search
MKDLVKFLKAQSKSNDDFDVIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELACPVAHIWFLKS
LPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQLLTEEQFLDAEERWGDEFEAK
MGAEGIQALLRDMDLEHQCEMMREELQETNSETKRKKITKRLKLLEAFQQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLHLHQCGLPKKNGIGIIPSVYLF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagtaaagtttttaaaagcacaatcgaaatcgaatgatgattttgatgta
attaaaattggtttagcatcaccggataaaatccgttcttggtctttcggtgaagtaaaa
aaaccggaaacaattaactatcgtacctttaaacctgagcgtgatggtcttttctgtgca
cgtatcttcggaccggtaaaagattacgaatgtctttgtggtaaatataaacgcttaaaa
caccgtggtgtaatttgtgaaaaatgtggcgttgaagtaacccaaactaaagtacgtcgt
gaccgtatgggtcatatcgaacttgcgtgtccggttgcgcacatttggttcttaaaatca
cttccgtcccgtatcggtttaatcttagatatgccgttacgcgatatcgaacgtgtactt
tacttcgaatcttatgtagttaccgaaccgggaatgaccgatttagaaaaaaatcagtta
ttaaccgaagaacagttcttagatgcggaagagcgttggggcgatgagtttgaagcgaaa
atgggtgcggaaggtattcaagcacttctacgcgatatggacttagagcaccaatgtgaa
atgatgcgtgaagagttacaagaaacgaactctgaaacaaaacgtaagaaaatcacaaaa
cgcttaaaattattagaagcattccaacaatccggcaacaaaccggagtggatggtaatg
accgtattaccggtacttccgccggatcttcgtccgttagtaccacttgacggaggtcgt
tttgcgacttcggatctgaacgatttatatcgtcgcgtgatcaaccgtaacaaccgttta
aaacgcttattagatttagtagcgccggatatcatcgtacgtaatgaaaaacgtatgtta
caagagtctgtcgatgcgttattagataacggtcgtcgtggtcgtgcaattacaggttct
aacaaacgtccattaaaatctcttgcagatatgatcaagggtaaacaaggtcgtttccgt
cagaacttattaggtaaacgtgtggactattcaggccgttcggtaatcaccgtaggtcct
tacttacacctacaccaatgcggtttaccgaaaaaaaatggcattggaattattccgtcc
gtttatttattctaa
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