Actinobacillus lignieresii: NCTC10568_02161
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Entry
NCTC10568_02161 CDS
T06678
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alig
Actinobacillus lignieresii
Pathway
alig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10568_02161 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alig03021
]
NCTC10568_02161 (rpoA)
03400 DNA repair and recombination proteins [BR:
alig03400
]
NCTC10568_02161 (rpoA)
Enzymes [BR:
alig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10568_02161 (rpoA)
Transcription machinery [BR:
alig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10568_02161 (rpoA)
DNA repair and recombination proteins [BR:
alig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10568_02161 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
VEB27371
LinkDB
All DBs
Position
1:2104247..2105236
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVNIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVSGKDDIILTLNKSGIGPVTAADITHDGD
VEIVNPHHVICHLTDKDASISMRIRVQRGRGYVPASARVHSQDEDRPIGRLLVDARFSPV
DRIAYNVEAARVEQRTDLDKLIIEMETNGTIDPEEAIRRAATILAEQLDAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagaatttttaaagccgcacttagtgaatatcgaacaagttagt
tctactcacgcaaaagtgaccttagaaccgttagaacgtggttttggccatacattaggt
aacgcacttcgtcgcattttactttcgtctatgccgggttgtgccgttacagaagttgaa
attgatggtgtattgcatgaatacagcagcaaagaaggcgtacaagaagatattcttgaa
gtattgttaaaccttaaaggtctagcggtaaaagtgtcgggtaaagatgatattattttg
acactaaataagtctggaattggccctgtaactgcagccgacattacgcatgatggtgac
gtagaaattgtaaatccacaccatgttatctgtcatttaacagataaagacgcatcaatt
agtatgcgtattcgtgttcagcgtggtcgtggttatgtaccggcatctgctcgcgtacat
tctcaagatgaagatcgtccaatcggtcgtttattagttgatgctcgtttcagcccagta
gatcgcattgcttataatgtggaagctgcgcgtgttgaacagcgtactgacttagataaa
cttatcattgagatggaaacaaatggcacaatcgatccagaagaagccattcgtcgcgct
gctacaattttagcagaacagttagatgcattcgttgatttacgtgatgttcgtcagcct
gaagtgaaagaagaaaaaccggagttcgatccgattttacttcgtccggtagatgattta
gagctgacagttcgttctgctaactgtttgaaagcagagacaattcactatatcggtgat
ttagtacaacgtacagaagtcgagttattaaaaacacctaatcttggtaagaaatcactt
actgagattaaggatgtgcttgcttctcgcggcttatcactgggtatgcgccttgagaat
tggcctccggcaagtattgccgaagactaa
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