Actinobacillus lignieresii: NCTC10568_02318
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Entry
NCTC10568_02318 CDS
T06678
Symbol
pgaB
Name
(GenBank) biofilm PGA synthesis lipoprotein PgaB
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
alig
Actinobacillus lignieresii
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Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
VEB27520
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Position
1:2263146..2264918
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AA seq
590 aa
AA seq
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MIFKKFSRIIIACLSFLSINVLANNTYSVLAYHSVVDESAPKDKRLYVSQTISSDQLIAH
FNWFKSQGYNIVSWQQIVDAEKGKNKLPNKAVLLSFDDGYETMYSVIYPLLKAYNYPAVF
APVSSWISTPMGQKIQYGNEKLDREKFFATWQQIDEMQNSGLVEIASHTHDLHHGIKANP
GGSQLAAMIAPEYKNGKYETEEQYKSRILNDMKISSGLIKKHTGKAPQIMVWPYGAFTET
TIKLAKEAGMPYHFTLKEKVNRVGDAHVGRFLVDAESNFSVMARYLNRVADTDNESFVQR
KLHINLDFVYSPDPIKFKANYDALISNVAKYGVTAVYLKAYSDSNKDGIIDAVYFPNKYL
PVRADIFSQVAWQLRTRAGVKVYTWMPASLESLPENLRQVNVMQSLYRDLSLYSKTDGLF
FDSKIGKHKWIDNSKETMALTKLWTEAAEPYFFFNRYTQRISRNIHPLDTNFTQNLVEFS
KNYDGILIEVRPYSLGGVTTKREAKNWLLDIVQRVKDSNVEKKQILFDFSVVNPKTSENL
SSEELISWIKLLEKHQIISFGYYPNRYLFDEKMLQKMKPYVSSNRDITRK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatatttaaaaaatttagtcgaataattatcgcttgtttgtcttttttatcaataaac
gtattggcgaataatacttatagcgtattggcttaccattccgttgtcgatgaaagtgcg
cccaaagataaaagattatatgtctcgcagacgatttcttccgatcaattaatcgcgcat
tttaattggtttaaaagtcaaggatataacattgtaagctggcaacaaattgttgatgct
gaaaaggggaaaaacaaacttccgaataaagcggtattactgtctttcgatgacggttat
gaaacgatgtatagcgttatttatccgctattaaaggcttataactatccggcggtcttt
gcgcccgtttcaagttggattagcacgccgatgggacaaaaaatccaatacggtaatgaa
aaactggatcgcgagaaattctttgcgacttggcaacaaatcgatgaaatgcaaaacagc
ggtttagttgaaattgcctcgcacactcatgatttacaccacggtataaaagcaaatcct
ggcggtagccagctggcggcgatgattgcaccggaatacaaaaacggtaaatacgaaacg
gaagaacaatataaatcccgtattctgaatgatatgaaaatatcttccggtcttattaag
aaacacacgggcaaagcgccgcaaattatggtttggccttatggcgcttttaccgaaaca
acaattaaattggcaaaagaagccggaatgccgtatcactttactttgaaagaaaaggtg
aatcgtgtcggcgatgcgcatgtaggacgttttctcgttgatgcggaatctaatttctcc
gtaatggcacgttatttgaatcgagtggcggatacggataacgaatcctttgtacagaga
aaattacatattaatttagacttcgtatatagcccggatccgattaagtttaaggcgaat
tacgatgccttgattagtaatgtcgctaaatacggcgtaacggcggtgtacttaaaagcg
tattcggatagcaataaagacggcatcattgatgcggtctatttccctaataaatatctt
ccggtaagagcggatatttttagtcaggtggcttggcaattacgtacgcgtgccggggtg
aaagtttatacgtggatgccggcttcgctcgagagcttacctgagaatttacgtcaagtg
aatgtgatgcaatcgctttaccgagatttatcgctttattcaaaaacggacggattattc
tttgacagcaaaatcggcaaacataaatggatcgataattcgaaagaaacgatggcgctg
acgaaattgtggacggaagcggcggaaccttacttcttctttaatcgatatacgcaaaga
atttccagaaatattcacccgttagatacgaattttactcaaaatttagtcgagtttagt
aagaattacgacggtattttaattgaggtgcgcccttattcgttaggcggtgtgacgact
aagcgggaagctaaaaattggttactcgatatcgttcagcgagtgaaagattctaatgtt
gagaagaaacagattttattcgatttctcggtagtgaatcccaaaacatcggaaaatctc
tcgtcggaagagttgatcagctggattaaattattagaaaaacatcaaataataagtttc
ggttattacccgaatagatatttatttgatgaaaaaatgctgcaaaaaatgaaaccttat
gtttcaagtaatagagatatcacaaggaagtag
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