KEGG   Actinobacillus lignieresii: NCTC10568_02404
Entry
NCTC10568_02404   CDS       T06678                                 
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
alig  Actinobacillus lignieresii
Pathway
alig03030  DNA replication
alig03430  Mismatch repair
alig03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC10568_02404 (holD)
   03430 Mismatch repair
    NCTC10568_02404 (holD)
   03440 Homologous recombination
    NCTC10568_02404 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alig03032]
    NCTC10568_02404 (holD)
   03400 DNA repair and recombination proteins [BR:alig03400]
    NCTC10568_02404 (holD)
Enzymes [BR:alig01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCTC10568_02404 (holD)
DNA replication proteins [BR:alig03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NCTC10568_02404 (holD)
DNA repair and recombination proteins [BR:alig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NCTC10568_02404 (holD)
SSDB
Motif
Pfam: DNA_III_psi
Other DBs
NCBI-ProteinID: VEB27604
LinkDB
Position
1:2336657..2337079
AA seq 140 aa
MNRRDLLLNEMNIPQWVLTKPQVLKGDAQIRLDNAVKLVVVCEENHQASGLFLDILRTLQ
LQPNQYQWLDAEQAQRLAFEHHPIFWLIQAESQAVEIAKKFANQTAWQHSSWQDLTNVAT
KRQLWQQMTAFCQHFEDNHD
NT seq 423 nt   +upstreamnt  +downstreamnt
atgaatcggcgagatttgctattaaatgagatgaatattcctcaatgggtgctgacaaaa
ccgcaagtattaaagggcgatgcgcaaattcgcttggataatgcggtgaaactggttgtg
gtatgtgaagagaatcatcaagctagcggtctgtttttggatattttacgcaccttgcag
ttacagccgaaccaatatcaatggttggatgcggaacaagcccagcgtttagcttttgaa
catcatcctattttttggttaatccaagcagaatcacaagcggttgaaattgcaaaaaaa
tttgcaaatcagaccgcttggcaacatagttcatggcaagatttaactaatgttgcaact
aaacgccaactttggcaacaaatgacggcattttgtcagcattttgaggataatcatgat
tga

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