Aliinostoc sp. HNIBRCY26: ACQFX9_12445
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Entry
ACQFX9_12445 CDS
T11712
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alih Aliinostoc sp. HNIBRCY26
Pathway
alih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQFX9_12445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alih03019
]
ACQFX9_12445
03016 Transfer RNA biogenesis [BR:
alih03016
]
ACQFX9_12445
Enzymes [BR:
alih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACQFX9_12445
Messenger RNA biogenesis [BR:
alih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACQFX9_12445
Transfer RNA biogenesis [BR:
alih03016
]
Prokaryotic type
tRNA degradation factors
ACQFX9_12445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
TLN1-like_RS
KH_2
KH_KhpA-B
KH_SLS1_2
KH_NusA_1st
aRib
Motif
Other DBs
NCBI-ProteinID:
XTB94394
LinkDB
All DBs
Position
complement(2912016..2914172)
Genome browser
AA seq
718 aa
AA seq
DB search
MAEFEKSISFDGRDIRLKVGLLAPQAGGSVLIESGDTAVLVTATRSAAREGIDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPEKAILTSRLIDRPLRPLFPSWLRDDLQVVAFTMSMDE
LVPPDVLAVTGASIATLIAKIPFNGPMAAVRVGLVGDDFIINPTYAEIEAGDLDLIVAGS
PHGVIMVEAGANQLPERDIIEAIDFGYEAVRDLIKAQQDLVAELGLEFVQEAPPEVDQTL
ANYIRDRASDEIKKILAQFDLGKTERDNALDAVKENIATAIAELPEEDPIRVAAHADSKA
LGNTFKDITKYFMRRQIVEDNVRVDGRKLDEVRPVSCQVDVLPKRVHGSGLFNRGLTQVL
SACTLGTPGDAQNLNDDLQTDQSKRYLHHYNFPPFSVGETKPLRAPGRREIGHGALAERA
ILPILPPKEQFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIIKPVSGAAMGLIK
EGDEVRVLTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKISGLSLDVIAQAIHQAKAAR
LHILEKMLQTIETPRSETSPYAPRLLTIKIDPDMIGLVIGPGGKTIKGITEETGAKIDIE
DDGTVTISAVDENKAKRARNIVQGMTRKLNEGDVYAGRVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIVKVREIDNKGRINLTRLGIHPDQAAAAREAAAVNR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttgagaagtcaatatccttcgatggaagggatattcgactgaaggtaggc
ttactagcaccgcaagccggtgggtctgtgttgatagaatcaggggatacagctgttttg
gtaacagctacgcgatcagcagccagagagggcattgatttccttcccctgacagtagat
tacgaagaaagactatatgcagctgggagaattcctggtgggatcatgcgccgggaaggt
cgtccaccagaaaaagccattctgaccagccgtttgattgaccgtcccttgcgtcctttg
ttcccttcatggttgcgggatgacttgcaagttgtggcgttcaccatgtcaatggatgaa
ctagtaccaccagatgtattagccgtgacaggtgcttctattgccactttgattgcgaaa
attcccttcaatgggccgatggcagcagtacgggtaggtttggtaggtgatgattttatc
attaaccccacctatgcagaaatcgaagcgggagatttggatttgatcgtagctggttca
ccacatggtgtgatcatggtggaagcaggcgcgaatcaactgccagagcgagatattatt
gaagcgattgattttggctacgaagccgtgcgcgatttaattaaggcgcaacaagattta
gtagcggaactcggtttggaatttgtgcaggaagcaccaccagaggtagaccaaaccttg
gcaaattatattcgcgatcgcgccagcgatgaaattaagaaaattttggctcagtttgat
ttaggcaaaaccgaacgcgataacgcgttagatgccgttaaagaaaatattgccacagcg
atcgctgaactaccagaagaagatcccatccgcgttgctgctcatgctgatagcaaagct
ttgggtaacactttcaaagacattactaaatacttcatgcgccgtcaaatcgttgaagat
aacgtgcgtgtggatggtcgcaaactggatgaagttcgtcctgtttcctgccaagttgat
gtcctacccaagcgcgtccacggtagcggcttatttaatcgcggactcacccaggtacta
tccgcctgtacccttggtactcctggcgatgcccaaaaccttaacgacgacctccaaacc
gaccaatctaaacgctacctacaccactataatttcccccccttctccgtcggggaaacc
aaaccattacgcgcccctggtagacgcgaaattggtcacggtgcattagctgaacgggca
attttaccaatattaccgcccaaagaacaattcccctacgttattcgcgtagtgtcggaa
gtgctttcttctaacggttctacctcaatgggttctgtgtgcggttctaccctagcgtta
atggatgcaggtgtacccattattaaacccgttagcggtgcagcgatgggtctgattaaa
gaaggcgatgaagtccgagtcctcaccgatattcaaggcattgaagactttttgggtgat
atggactttaaagtcgccggcacagatacagggattacagccttacaaatggacatgaaa
atctctggtttatctttagatgtcatcgcccaagctattcaccaagccaaagctgctagg
ttgcacattctcgaaaaaatgctgcaaaccatagaaacaccacgcagcgaaacctcaccc
tatgcgccgcgtctgttgactatcaagattgatccagacatgattggtctagtcattggg
cctggtggtaaaaccatcaagggaattactgaagagactggtgctaaaatcgacatcgaa
gatgatggtacagttaccatttctgcggtagatgaaaataaggctaaacgggcgcgtaat
atcgttcaaggcatgactcgcaaattgaatgagggcgatgtttatgctggacgtgtgaca
cggattataccaattggtgcttttgtggaattcctccctggcaaggaaggaatgatccat
atttctcaacttgctgattatcgtgtaggcaaggtagaggatgaggtagccgtaggcgat
gaagtcattgtcaaagtgcgcgaaattgacaataaaggaaggattaacctcacacgcttg
ggtattcacccagaccaggcagcagcagcacgggaagctgcggcagtaaaccgttaa
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