KEGG   Aliiglaciecola sp. LCG003: QR722_00065
Entry
QR722_00065       CDS       T09143                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
alii  Aliiglaciecola sp. LCG003
Pathway
alii03030  DNA replication
alii03410  Base excision repair
alii03420  Nucleotide excision repair
alii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QR722_00065 (polA)
   03410 Base excision repair
    QR722_00065 (polA)
   03420 Nucleotide excision repair
    QR722_00065 (polA)
   03440 Homologous recombination
    QR722_00065 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alii03032]
    QR722_00065 (polA)
   03400 DNA repair and recombination proteins [BR:alii03400]
    QR722_00065 (polA)
Enzymes [BR:alii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     QR722_00065 (polA)
DNA replication proteins [BR:alii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     QR722_00065 (polA)
DNA repair and recombination proteins [BR:alii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     QR722_00065 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QR722_00065 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Prok-E2_E CNDH2_N
Other DBs
NCBI-ProteinID: WJG09471
LinkDB
Position
complement(14311..17088)
AA seq 925 aa
MAIVPPNPFVLVDGSSYLFRAFHGMPPLTNSKGQDTGAIYGVVNMLRSLMKQYSPTHMAV
VFDAKGKTFRDDIYPLYKANRPPMPDELRSQIAPLHKIIRAMGLPIIVEDGVEADDVIGT
LAQQATDHGIDTLISTGDKDMAQLVNQHVTLINTMNNQIMDVDGVREKFGIPPELIIDFL
ALKGDKVDNIPGVPGVGDKSALGLLQGIGGIDAIYQNLDKIADLDFRGAKKMADKMREYE
EQARLSYELATIKLDVELEFNPRELVPTPPLSDELSELFKEYEFKRWFEEASKGGNILAG
KTATPAQSDDKAEAKAAPALDSSAKYSTILTKQDLDEWLEKLQNAELFAFDTETTSLNYM
EAELVGMSFCIQPGEAAYLPLAHDYPDAPEQLDRNMVLELFKPLLESEQHKKVGQHIKYD
KNVLANYHIDLAGIEFDTMLESYVLNSVATRHDMDSLAKHYLQHNNITFEEIAGKGAKQL
SFNQIPLEQASPYAAEDADITLRLHQTLWQQLSQDSKLQSVFSQIERPLISVLAKMEQGG
VLIDSQTLLQQTQDLASRIMQLEKEVHDMAGEEFNLGSTKQLQEILFNKLDLPVLKKTPK
GAPSTAEEVLHELALNYPLPKLLLEYRGLTKLKNTYTDKLPKMINPRTGRVHTSYHQAIT
ATGRLSSTDPNLQNIPIRTAEGRKVRQAFVARPGYKIVAADYSQIELRIMAHLSKDKGLV
DAFSSGKDVHKATAAEVFSVGLDEVTSDQRRSAKAINFGLIYGMSAFGLSRQLNIPRQDA
QKYMNVYFERYPGVLGYMEDTRVSAKELGYVSTVFGRRLYLPDINASNGMRRQGAERAAI
NAPMQGTAADIIKMAMIKVDQWIDGLANDDVKMIMQVHDELVFEIKEQKVAEHTKTIIAL
MEAAVSLSVPLIVEAGTGENWDEAH
NT seq 2778 nt   +upstreamnt  +downstreamnt
atggcgatagttccccctaatccgtttgttttagttgacggctcctcctatctgtttcgt
gccttccacgggatgccccctttgacaaattctaagggccaggacactggcgcaatttac
ggtgttgttaatatgcttagaagtcttatgaagcaatactctccaacacatatggccgtc
gtctttgatgccaagggtaaaacattccgcgatgacatttaccccctctacaaggctaat
cggccacccatgcccgatgaattacgcagtcaaattgctcccctacataaaataatcagg
gccatggggctaccgattattgttgaagatggagtagaagctgatgacgtaattggcact
cttgcgcagcaagcaacggatcatggtattgacaccttgatcagcacaggtgataaagac
atggcgcagttagtcaatcaacacgttaccttgatcaacactatgaataatcaaataatg
gatgttgatggggtacgggaaaagttcggcatcccacctgaattaattattgatttcttg
gcacttaaaggcgacaaggttgataatattcccggagtgccaggggttggcgataaaagt
gcactaggtcttttacaaggtataggtgggatcgatgccatttatcaaaatctggacaaa
atagcagatcttgacttccgtggtgccaagaaaatggctgataaaatgcgagagtatgaa
gaacaagcacggttgtcctatgaattagccaccataaaattagatgttgaacttgaattc
aatccacgtgagttagtacctactccgcctttaagcgatgaattatcagaactttttaaa
gaatatgagtttaaaagatggtttgaagaggccagtaaaggtggcaatattttagcgggt
aaaacggctactcctgcgcaatcagatgacaaggctgaggcaaaagccgcaccagcccta
gatagcagcgctaaatatagtaccattttgaccaaacaggatttagacgaatggcttgaa
aagctacaaaacgccgaactatttgcatttgatacagagacaaccagcctcaattatatg
gaggctgaattagtaggcatgtctttttgtatacaacccggcgaggctgcttatcttcct
ttggctcacgactaccctgatgcgcccgagcaactagatcgaaatatggtgttagaactg
ttcaaacctctattagaaagtgaacaacacaagaaggtcggccaacatataaagtatgat
aaaaatgtactggccaactaccatatagacttagcgggtatcgaattcgacaccatgttg
gaatcttatgtattaaacagtgttgcgactcggcatgatatggatagccttgctaaacac
tatttacagcataataacatcaccttcgaggagatagccggcaagggagcaaagcagctc
agtttcaatcaaataccgttagaacaagcctcaccttatgctgcggaagatgctgatatt
actctgcgcttgcatcaaaccctttggcaacaattgagtcaagacagcaaattgcaatct
gtgtttagccaaattgaacgaccgctcatttcggtgttagccaaaatggaacaaggggga
gtgttaattgatagccaaacattgctacaacaaactcaagatttagctagtcgtattatg
cagttagaaaaagaagtgcatgatatggcgggagaagagttcaatttaggttcgaccaag
caattacaagaaatactgtttaataaattagacttacctgtccttaaaaagacccccaaa
ggcgcaccttccaccgctgaagaagtcctacatgaacttgctttgaactatcctttacct
aaattgttattggaataccgtgggttaactaaattaaaaaatacttacactgataagtta
ccaaagatgatcaacccacgcacaggacgtgtgcacacctcttatcaccaagccataacg
gcgacaggaaggctatcatctacagatccgaatttacaaaacattcctattcggactgcg
gaaggccgtaaagtcagacaagcctttgtggcccgtcccggatataaaattgtagctgcg
gattattctcaaattgagcttcgtattatggcccatttgtctaaagacaaggggctggtg
gatgcgttttcaagtggtaaagatgttcacaaagctacagctgcagaggtattttctgtc
ggccttgatgaagtaacaagtgatcaacgacgcagtgctaaagcgattaattttggattg
atttacggtatgtcagcctttggcctgtctcgtcagttaaatattccaaggcaagacgca
caaaagtatatgaatgtctatttcgagcgctaccctggcgttttagggtatatggaggat
actcgggtatcagccaaagaattaggttatgtatcgacggtatttggtcgcaggctatat
ttacctgatatcaatgcgagtaatggcatgcgtcgtcaaggtgcagagcgggccgcaatc
aacgcccccatgcaaggcacggctgcagatataatcaaaatggcaatgattaaagtggat
cagtggatcgatggtctagctaatgatgatgttaaaatgatcatgcaagtacatgatgag
cttgtttttgaaataaaagaacaaaaagtagctgagcacactaaaaccattatagcgcta
atggaagcagccgtttcactttcagtcccgctaattgtggaagctggaacaggagaaaat
tgggatgaagcgcactaa

DBGET integrated database retrieval system