Aliiglaciecola sp. LCG003: QR722_00565
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Entry
QR722_00565 CDS
T09143
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
alii
Aliiglaciecola sp. LCG003
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alii03000
]
QR722_00565
Transcription factors [BR:
alii03000
]
Prokaryotic type
Helix-turn-helix
LysR family
QR722_00565
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
OpuAC
BLOC1S3
Motif
Other DBs
NCBI-ProteinID:
WJG09563
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Position
129834..131132
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AA seq
432 aa
AA seq
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MMICISKNDVPDLSLRQLKAVVYVNKCKNVTKAANELNRSQTAITKAINDLELRLNRQLF
DRSSTGMMPTVYGKAVAKRAQLALDELQKAGVVYASFMKDSRPYHVIPIFSMDVSYKRLA
AFIALFEKKNFQCAADSLGNTKASIYSSVRQMEEWLGLKLFETEPDGVSPTAFGKILAMH
VKMAFAEIRRCLEDLVSIDGVTQGSVNIGTLPYTRTYITPKAINQVLLEHPELDVTTQEG
SYGVMEAALRSGDIDFIVGAVREHEPGSDITTEILFEDKLAVIARADHPLMLQKQINLQL
LQGLPWVLPAKGSPAWHLFNETLESYNMIHPEHAIHTSSLSMVRGLLIDSDRVALLSEHQ
IYYEKKCGLLDVLPVELPDTYRPIGVTLRKASQPSPAAKLCLDQLRIVAEQVKQLAKPSY
NIQSSIPRKIPA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctgtattagcaaaaatgatgtgcctgaccttagcttgcgccagctaaaagca
gtcgtctatgtgaataaatgcaaaaatgtcactaaagcagcgaatgaacttaatcgctca
caaaccgctatcactaaagcgataaatgatttggaattacgtctaaatcgccaattattt
gatcgctcgtccactggcatgatgccaacggtttatggcaaagctgtggcaaaacgtgcc
caattagcccttgatgaattgcaaaaagccggtgtggtctacgccagctttatgaaagat
agtcggccttaccacgttatcccaatattctcgatggatgtaagttacaagcgtttggct
gcatttatcgccttgtttgaaaagaaaaattttcagtgcgcggctgattctctaggcaat
actaaagcctcaatatatagctctgttcgtcagatggaagagtggttgggtttaaagttg
ttcgaaaccgaacctgatggtgtctcaccaacggcttttggcaaaatattggccatgcac
gtgaaaatggccttcgctgaaatacgcaggtgcctagaggatttggtcagtatcgacggt
gttactcagggctcagtcaatataggtactttgccttacacccgaacctatatcactcct
aaggccataaaccaggtgttattagagcatcccgaactagatgttactactcaggaaggc
tcttatggtgtaatggaggcagccttacgtagcggtgacatcgactttattgttggcgcc
gtacgtgaacatgaacccggttcagatatcaccacggaaattttatttgaggataaattg
gccgtgattgcccgtgccgatcatcctttgatgttacaaaagcagattaatcttcaattg
ttgcagggtttgccttgggtgttgccggctaaaggctccccagcatggcacttattcaat
gaaactctggagagttataatatgattcatccagaacatgcaattcacactagttcgtta
tcaatggtacgtggattattaatcgacagtgatagagttgcactgttgtcagagcatcaa
atttattacgaaaaaaaatgtggtttgttggatgtgctgcctgttgaactcccagatacc
tatcgaccaattggcgttactttgcgtaaagcatcgcagccctcgcctgcggctaaactt
tgtttagatcagttgcgtatcgtggctgagcaagtcaaacaattggcaaaacctagttat
aatattcagtcaagtattccgcgaaaaataccagcttga
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