Aliiglaciecola sp. LCG003: QR722_00950
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Entry
QR722_00950 CDS
T09143
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
alii
Aliiglaciecola sp. LCG003
Pathway
alii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QR722_00950 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alii03019
]
QR722_00950 (recQ)
03400 DNA repair and recombination proteins [BR:
alii03400
]
QR722_00950 (recQ)
Enzymes [BR:
alii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QR722_00950 (recQ)
Messenger RNA biogenesis [BR:
alii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QR722_00950 (recQ)
DNA repair and recombination proteins [BR:
alii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QR722_00950 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Int_N
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
WJG09636
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Position
complement(225262..227088)
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AA seq
608 aa
AA seq
DB search
MNNPKDLSQYPEKSAQDILQQVFGYDHFRLGQEAVIEQTLAGKDTLVLMPTGGGKSLCYQ
IPALVLPGITVVVSPLISLMKDQVDALVTSGVSATYINSSIPRENLLDIYRQLQDGKFKL
LYVAPERLMQIDFINRLHSLQLSLIAVDEAHCVSHWGHDFRQDYRLLGQLKQHFPMVPVM
GLTATADVATRADIQQQLNLHEPFIFQSSFDRPNIRYNLLAKYKAVDQLVQYVKSQEGSG
IVYCNSRAKVDELSTKLARQGLSCAGYHAGLETEIRDKIQRDFIQDNIDIIVATVAFGMG
INKSNVRFVVHFDLPRSIESYYQETGRAGRDGMPAEALLLFDEKDAARIRQWISMGENTE
RQDIELQKFAAMEAFADAQTCRRQVLLNYFSEYSGDHCGNCDICVDPPKRFDGTTDAQKV
LSCVYRLGQNVATQYVIDVLKGKALKRIIEQQHEQISTYGIGKAQSDAYWHNLIGQVIHQ
GLLRIDITQNATLKLTEAARAVLKGEKAISLAVPRLALDTAKASKNDKRYYDRALFAKLK
HLRKSIAEQDDVPPFVVFSDASLADMAEQLPQNSGQFLQISGVGNTKLERYGERFLTLIN
DYVSQPSY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaccctaaagacctatcccaatacccagagaaatcagcccaggacatcctgcag
caggtattcggttatgatcatttccggttgggccaagaggctgtaattgagcaaacacta
gcaggcaaagataccttagtcttgatgccaacaggtggcggaaagtccttatgctaccaa
atacctgcattagtgttacctggtatcactgtcgtggtatcaccgctaatatcattgatg
aaagaccaagtggacgcactagttacctctggtgtatcggcgacttatatcaattcttcg
ataccccgtgagaacttattagatatttatcggcaattacaagatggcaaatttaagctg
ctctacgtagctcctgagcgattgatgcaaatcgattttatcaaccgactgcacagtttg
cagttgagcttgatcgctgtggatgaagctcactgcgtatctcactggggtcatgatttt
cgtcaagactatcgattgctaggtcaactaaagcagcatttcccaatggttccagttatg
ggcttgaccgcaacggcagatgttgccactcgtgcagacattcaacaacagctcaattta
catgagccatttatttttcaaagtagcttcgaccgaccgaatattcgctacaacctatta
gcaaaatataaggctgtcgatcaacttgtccagtatgtgaaatcccaagaaggcagcggc
attgtatattgcaatagccgagctaaggtggatgaattaagcaccaaactagcgcgacaa
ggcttaagctgtgccggctatcacgcaggattggaaactgagatccgtgacaaaattcaa
cgagactttatacaggacaacatcgacatcattgttgccactgtcgctttcggcatgggt
atcaataaatcaaacgtgcgatttgtagtgcactttgatttgccacgcagcatagagtct
tattatcaggaaactggacgagctggtcgagatggcatgccagcagaagccttgttattg
tttgatgaaaaagacgcagctcggatcaggcaatggatcagcatgggcgagaataccgag
cgccaagatattgaattgcaaaagtttgcagcgatggaagcctttgcggatgcccaaaca
tgtcgtcggcaggttctgctaaactatttttctgaatacagcggtgatcattgcggcaac
tgcgatatttgtgtcgacccgccaaagcgctttgatggcacaacagacgcccaaaaggta
ttgtcttgtgtataccgcctaggccagaacgtggctacccagtacgtaattgacgtactt
aagggtaaagccctcaaacgtataattgaacaacagcatgagcaaatcagcacctatggc
attggtaaagctcaatcagatgcttactggcataacttgattggccaagtgattcaccaa
ggactcttacgtattgatataactcagaacgccactctcaagttaactgaggcggcaagg
gccgtactcaaaggcgaaaaagccatatcattagcagtacctagattggcgctcgatact
gctaaagcgagtaaaaatgataaacgctattacgacagagcattatttgctaaattgaaa
catcttagaaaatctatagcagaacaagatgacgttccaccatttgtagtattcagtgat
gccagtttagcggatatggccgaacagctcccgcaaaattccggccagttcttacagatt
agtggtgtaggcaacactaagctagagcgctatggcgagcgtttcctaacacttattaat
gattacgttagccaacccagctactaa
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