Aliiglaciecola sp. LCG003: QR722_01065
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Entry
QR722_01065 CDS
T09143
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alii
Aliiglaciecola sp. LCG003
Pathway
alii03420
Nucleotide excision repair
alii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QR722_01065 (uvrD)
03430 Mismatch repair
QR722_01065 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alii03400
]
QR722_01065 (uvrD)
Enzymes [BR:
alii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QR722_01065 (uvrD)
DNA repair and recombination proteins [BR:
alii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QR722_01065 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
QR722_01065 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WJG09657
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All DBs
Position
complement(248227..250395)
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSRLLDQLNDKQREAVAAPASDMLVLAGAGSGKTRVLVHRMAWLMEVEQLAPFSILAV
TFTNKAAREMRGRVERLMGSALHNMWIGTFHGLAHRLLRTHYKEARLPENFQILDSDDQY
RLVRRVIKSLNLDEKNWQPKSIQWYINGNKDEGLRAEHIDTQGDPTKQTMKDIYQAYQQT
CDRSGLVDFAELLLRAHELWLKNPDVLKHYQRRFRTILVDEFQDTNNIQYAWLKLLSCKD
NNMIIVGDDDQSIYGWRGANVENIQHFLRDFPSASTIRLEQNYRSTGNILKAANAVIDNN
SGRLGKNLWTEDAEGEAISLYAGFNELDEARFIVARIKEWSDKGDALSDCAILYRNNAQS
RVLEEALLQESIAYRIYGGLRFFERQEIKDALAYLRIVNQPIDDAAYERIVNTPTRGIGE
KTLGLIRESARNNEQSMWQATQTMLAEKRLSGRAASALQSFVELVLKLQSAIRDLELDQQ
ADHVIKHSGLFAMYQAEKGEKAQARIENLEELVSACKQFEMPLEADNMTPLSAFLAHASL
EAGEAQADAHQDAVQMMTIHSAKGLEFPLVFLAGVEEGMFPSQMSNEEPGRLEEERRLCY
VGMTRAMQKLYMTYAESRRLYGQDKYHTPSRFIKEIPSDCIEEVRLRTTISRPTKNRFQT
ATSHMAFESTGFQLGQRVSHPKFSEGTVLNYEGSGEHARVEVNFDNFGTKWLMLAYARLD
KI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctagactgctcgaccaacttaatgataaacaacgagaagccgttgctgca
ccggcgtcagatatgttggttctggctggggctggcagtggcaaaacccgtgtattggtt
catcgcatggcgtggttaatggaagtcgagcaactcgctccttttagtatcttagccgtg
acctttactaataaggcagcccgtgaaatgcgcggtcgtgttgagcggttaatgggttca
gctttacataatatgtggattggtacttttcacggcttagctcatcgcctgttacgcacc
cattacaaagaagcccgtttgccagaaaacttccaaattttagactcagatgatcaatat
agactcgtcaggcgggtgataaagtcgttgaatttagatgaaaaaaattggcagccaaaa
tctattcaatggtacatcaatggcaataaagatgagggcttgcgagcagagcatattgat
acccaaggtgatcccaccaaacaaaccatgaaagatatttatcaggcctatcaacaaacc
tgtgatcgctccgggctagtcgattttgctgagctattattgcgggcgcacgagttatgg
ctgaaaaatcctgatgtgttaaaacactaccaacgccgttttcggactattttggtagat
gagttccaagatactaataatattcaatatgcatggttgaagttattaagctgcaaagac
aacaatatgataatagtcggtgacgatgaccaatccatatatggttggcgcggtgctaac
gtcgaaaatatccaacatttcttgcgtgacttccccagcgcatcgactattcgcttagag
caaaactatcgttctacaggtaacatattaaaagccgccaatgcggtaatagataacaac
agtggccgcttaggtaagaacctatggaccgaagatgccgaaggcgaagccatctcctta
tatgccggttttaacgaactggatgaagcgcgctttattgttgcacggatcaaagagtgg
tctgataaaggcgacgccttatctgattgtgccattttatatcgaaacaatgcccaatct
cgggtacttgaagaagccttattgcaagagtctattgcttatcgcatatatggcggccta
cgctttttcgaacgacaggaaattaaagacgcattggcttatttacgtattgtgaaccag
cctattgacgacgccgcgtatgagcgtatcgtcaacactccgacgcggggcattggcgaa
aaaacactgggtttgatcagggaatcagctcgtaataatgaacaatccatgtggcaagca
actcagacaatgttagccgagaaacgcttgtctggccgagccgcctctgcactacagagc
ttcgtcgaattagttttaaaattacaaagtgctatacgtgacttagaactagaccaacaa
gccgaccatgtaattaagcattcaggtttatttgctatgtatcaggctgaaaagggtgag
aaagcccaagcgcggattgaaaacttagaagaattggtcagtgcttgtaaacaatttgaa
atgccattggaagccgataacatgacaccactatcagctttcttagcccatgcttcatta
gaagcaggcgaagctcaagctgacgctcatcaagacgccgtgcaaatgatgacgattcac
tctgcgaaaggactagagttcccactggttttcctggcgggcgttgaagagggtatgttc
ccaagtcagatgagtaacgaagagcctggtagattagaagaagagcgtcgtctttgctat
gtaggcatgacgcgagctatgcaaaagctgtatatgacctacgcagaaagccgtcgatta
tatggccaagacaaatatcataccccttctcgatttattaaagagatcccttctgattgt
attgaggaagttagactgcgtactactatcagtaggcctaccaaaaatcgattccaaact
gccacgtcacatatggcgtttgaatccactggctttcaattgggtcaacgtgttagtcat
ccaaaattttccgaaggcacagtgttgaactatgaaggaagcggagaacatgcccgggta
gaagttaactttgataatttcggtacaaaatggctaatgttagcctatgctagactagat
aaaatatag
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