Aliiglaciecola sp. LCG003: QR722_04590
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Entry
QR722_04590 CDS
T09143
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alii
Aliiglaciecola sp. LCG003
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alii03032
]
QR722_04590
03400 DNA repair and recombination proteins [BR:
alii03400
]
QR722_04590
Enzymes [BR:
alii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QR722_04590
DNA replication proteins [BR:
alii03032
]
Prokaryotic type
DNA Topoisomerases
QR722_04590
DNA repair and recombination proteins [BR:
alii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QR722_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HTH_32
Motif
Other DBs
NCBI-ProteinID:
WJG10319
LinkDB
All DBs
Position
complement(1100288..1101313)
Genome browser
AA seq
341 aa
AA seq
DB search
MDSNQPSTGFIFRKRWGKGFQYFDTNNRKVTNRQRLNRIRSLTIPPMWEDVLIATDTQAK
VQATGRDDKGRKQYIYSEQWQLAQQGIKFERLVSFAQALPKLRKTCTDLLSNKQWSPSNV
IALMILILDHTGIRIGNKRYSQHNNTYGLSTLRRKHIVDNQQGLEFQFVGKSGKDRSVKI
DDEHLANLIDLASQQPGYQIFRYKNIANQWSDVSCDEVNAFIKAEMGEEFSCKDFRTWTG
TCLAVEYYCELIQQAVHNPKKKKLKKNQLHRNTTTKVIKMVAKSLGNTPAICKQYYIHPK
VLLSIDEQRIDPSTVCDVSFDKAETGHSAAEKQVLKILSSN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaatcaaccaagcactggctttatatttcgaaaacgttggggcaagggtttt
caatattttgataccaacaaccgcaaggttactaaccgtcagcgtttaaatcgtattcga
tcgctcaccattccgccaatgtgggaagatgtactgatcgctaccgatacacaagcgaaa
gtgcaggcaacgggacgagatgacaagggtcggaaacaatatatttatagtgaacaatgg
caactagcacaacaagggatcaaatttgaacgtctagttagtttcgcacaagccttgccc
aagcttcggaaaacctgcacagacctattatcaaataaacaatggtcgccaagtaatgtt
atagctctgatgatcctaattctcgatcacactggcattcgcattggtaacaaacgctat
tcacaacacaataacacctatgggctatccactcttcgtcgcaagcatattgtcgacaac
caacaagggttggagtttcagtttgttggcaaaagtggcaaagatcgtagcgttaaaatt
gatgatgaacacctagcaaatttgattgatttagccagccaacagcccggttatcagata
ttcagatataaaaatatcgctaatcaatggtccgatgtcagttgtgatgaagtgaatgct
tttataaaggccgaaatgggcgaggaattcagttgtaaagactttcgaacatggacaggc
acatgtttggcagttgagtattactgtgaattaattcagcaggctgttcataacccaaaa
aagaaaaagctaaagaaaaaccaattacacagaaacactaccaccaaggtaatcaaaatg
gtggcaaaatctctgggtaacacacctgcaatttgtaaacagtactacattcatcccaag
gtgcttctcagtatcgatgaacaacgaattgatcccagtacagtatgtgatgtcagcttc
gataaagcggagactggacacagtgccgcagaaaaacaagtacttaaaatactctcgtct
aactaa
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