KEGG   Aliiglaciecola sp. LCG003: QR722_04720
Entry
QR722_04720       CDS       T09143                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
alii  Aliiglaciecola sp. LCG003
Pathway
alii02020  Two-component system
Brite
KEGG Orthology (KO) [BR:alii00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    QR722_04720
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:alii02022]
    QR722_04720
Two-component system [BR:alii02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   QR722_04720
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 FleQ AAA_14 HTH_50 AAA_16 nSTAND3 ATPase
Other DBs
NCBI-ProteinID: WJG10344
LinkDB
Position
1134275..1135621
AA seq 448 aa
MTLPIIIVDDESAILHSLSQLLELEDYLPTTFTDARKALEILEPNWPGVILSDINMPGMD
GIAFLKSALKIDSELPIVMLTGHGDISTAVEAMRLGAYDFIEKPFSNEHILDVLKRAGEK
RALVLENRELKNELSAQGVAGPRILGNTAKIKELRRVLTHVKDIPADVLIKGETGSGKDL
VARYLHYNSTRHNENFVAINCGAIPESMIESELFGFEAGAFTSAQKRRVGKIEYANGGTF
FLDEIESMPMALQIKLLRVLEERRIEPLGSNKQVDLTIRFVAAAKVDLLELVGRGEFRED
LYYRLNVINIEIPPLRERKEDISLLFQHFAAMASTRFNTDTPKLTAEQIYHLKMHSWPGN
IRELRNTAERFVLMGGVSVLDSAESLTNGKAEMSLVEKVAHYETSVLQEALLANEGRLVD
VQQQLGLPRKTLYDKMRKYGLEKDDYKQ
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgactttacctattataattgttgatgatgaatcagcaatactgcattcactatcccaa
ctgttagagcttgaagattatctgccaaccacttttaccgatgcgcgcaaggcgctggaa
atattggaaccgaactggcccggagttattctcagcgatatcaatatgccaggcatggat
ggaattgcatttttaaaaagtgccctgaaaattgattctgaacttccgattgttatgttg
actggccatggtgatatatccaccgcggtagaagcaatgcgcctaggggcctatgatttt
atcgaaaagcccttttcaaatgagcatatcttagacgtcctaaagcgggcgggtgagaaa
cgtgcgttagtattagaaaacagagagctcaaaaatgagctttcagcgcaaggcgtggct
ggcccacggatactggggaataccgcaaaaattaaagaattacgcagagtactgactcat
gtaaaagatatacctgctgatgtactgatcaagggagagacaggttccggtaaagactta
gtcgctaggtatctgcattacaacagcactagacataatgaaaacttcgtcgcaatcaac
tgtggtgctattcctgaaagcatgattgaaagtgagttatttggatttgaagctggtgcg
tttaccagtgcccaaaagcgtcgagtgggcaaaattgaatatgccaatggcggtacattt
tttctagatgaaattgaaagcatgccaatggcgttgcagattaagttgcttcgtgttttg
gaggaaagacgtattgaacctctcggcagcaacaagcaagtagatctcactatccgtttt
gttgcggcagcgaaggtggatttgctcgaattagtcggcagaggtgagtttcgagaagat
ctctattatcgactcaatgtgatcaatattgaaattcctcctttgcgagaaaggaaagag
gatatttcgctactttttcaacatttcgcggcaatggcgagtacccgttttaacaccgat
acccccaaactaactgcggagcagatttaccaccttaaaatgcatagctggccgggcaat
atccgagagttgcgcaataccgccgaacggtttgtgttgatggggggagtatcagtactt
gatagtgctgaatctcttactaacggtaaagctgaaatgtcattagttgaaaaagttgcc
cactatgagaccagcgtgctgcaagaagcgttgctcgctaacgaaggacggctagtagac
gtgcagcaacagctcggtctacctagaaagacgctatacgataagatgcgaaaatacggc
ctcgaaaaggatgattacaagcagtaa

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