Aliiglaciecola sp. LCG003: QR722_05145
Help
Entry
QR722_05145 CDS
T09143
Name
(GenBank) PAS domain S-box protein
Organism
alii
Aliiglaciecola sp. LCG003
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_9
PAS
PAS_3
HATPase_c
PAS_4
HisKA
PAS_8
Diguanyl_cycl_sensor
HATPase_c_3
Receiver_CRE1
Motif
Other DBs
NCBI-ProteinID:
WJG10428
LinkDB
All DBs
Position
complement(1222715..1226266)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSKELDNSLPVRGEFQDPFLRNSSIPMLSCDRKGQTCFINAAACKLLGIQQQNSVGHSFL
HFFNNKAIRQQLTSILTHPPITASVNLEDSNPVKLTDAKDNTHYVSVVIDPIDNIQGCTA
LISLLPAQILHAEKRKNTNLLERYKIAVQSGIGVWQYDFSTQLLTWDEQMCRLYELDQSQ
FSGDLSDWSDYIQIEDREMALNEFNQAKNKDDCYEATFSITTAKGNEKYLQSVGRVIRDS
HGELIFSGICYDLTNQFNTQRKLQESMAKNAFLASVVQETDNSIIIFTPELKIRWANPAF
TEISGYSFEEAIGRTPLELLSGPLTDKSTIEALGLSVKEQRGFNCEIVNYAKNGTPYWIR
LSTQPLLEDGELKGFVAIESNITKQKESELQLLKTNNLKKTILNSTNQIIIATDLDGQIL
TFNKVAEKLLGYQADAVISQTTPELFFQRQALVAHAQIISLKVDKAIDADIRAITYLAST
GIAEEYESVFEHKNGHHFPVQLTVTPITSGKDIEGFLLVARDISELRGIEAEKERSTFLL
EATGRIAQLGGWEFDVQKDTLFWTQEVFRIHELPVGGEVEVDKAINYYVEHDRATLQSAL
NDAIEHGASFDLTLQFVTAKNNLRWVRSAGYPEKRDDGSVVIRGAFQDITNLKAAEENAK
EASRAKSEFLANMSHEIRTPINGIIGMNDLLLNSPLNEEQRHYAQLAQSSGNSLLVLIND
ILDFSKIEAGKLEIESIDFDLHDMLNTFIDTFTIRADDKNLQLVFEMQDSVPRWIKADPG
RIRQVLTNLTSNALKFTHRGKVVIKVNCVENNKLYFCIQDTGIGIPQEKQIHLFKKFNQL
DTSTTRKFGGSGLGLSISKQLVKLMEGEIGLNSEWHKGAEFWFYIRYQPAEHTHTPSNDI
FSRKELASLRILLVDDNAEQRKFLNSILSARNIEVVETTSAPQALKTLREPLNKPINVAI
INAELKGINGAELAKAIKNDERFAGVKLIVLAPNGQKGDAKKYQQVGFDAYFSAPVKPLD
LINSIVLVSNRTSIQSRSVKQSFDLITRHNASHSDADIARVLLVEDNPINQTVAFAMLKN
MGCHVELASNGLEAIEQLNNATKAFDLVLMDCQMPIMDGYEASRKIRAAQQANFDPNIPI
VALTANAMKGDEEKCVIAGMDGYLTKPIIAEELQKGLAKWLKK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaattagacaatagtttgcccgtacggggagagtttcaagatccattcttg
cgcaatagctctattcctatgctcagttgtgaccgcaaaggccagacctgttttatcaat
gctgcagcctgtaagttacttggcatacaacagcaaaactcagttgggcatagttttttg
cactttttcaacaacaaagctatccgccaacagcttaccagcatcctcacgcatccgcct
atcacggcgtctgtaaaccttgaagatagcaaccctgtcaaactaaccgatgcaaaggac
aacacgcactatgtatcggtagtcattgatcctattgataatattcaaggttgcacagct
ttgattagcttgctgcccgcgcagatactgcacgcagaaaagcggaaaaacaccaattta
ctggaacgctataaaattgcggttcaatctggaattggtgtctggcagtacgacttctca
acccaattgctgacttgggacgaacaaatgtgtcgtctttatgaacttgaccagagccaa
tttagtggcgatttgagtgactggagcgattacattcagatcgaagatcgtgaaatggca
ctgaatgaatttaaccaagcaaaaaataaagatgattgttacgaagccactttcagcata
accaccgccaaaggcaacgaaaaatacctgcaatcagtgggaagggtgatccgtgacagt
catggcgagttgattttcagcggtatttgttacgatcttaccaaccagtttaatacccaa
cgtaaacttcaagaaagcatggcgaaaaacgcatttcttgccagtgtggtgcaagaaacc
gacaattccatcattattttcactcccgagctcaaaattcgctgggccaacccggctttt
accgaaataagtggttacagctttgaagaggctattggaagaacgcctttagaattgcta
agtggcccactaacagataaatcgaccattgaagcattaggtctgtcggttaaagaacag
cggggatttaattgcgaaatagtcaattatgctaaaaacggtactccatattggataaga
ttaagcacccagccgctactggaagatggggaattaaaaggttttgttgccattgaaagc
aatataaccaagcaaaaagaatcagaattacagttgttgaaaaccaacaatctgaaaaaa
accatattaaacagcaccaatcagatcattattgctacggatttggatggccagattctg
acctttaataaagtggccgaaaaattactcgggtatcaggcagatgcggtaatttcacaa
accacaccagaattatttttccaacgccaagccttagtcgcccatgcacagatcatcagt
ctcaaagtagacaaagccatagatgcagatattcgagctatcacctatttggccagtacc
ggcatagcggaagaatacgaaagtgtatttgaacataaaaacggccaccacttcccagtg
caacttaccgttacgcccattactagtggtaaagacattgaaggctttctgttggtcgcc
agagatatctctgagcttagaggcattgaagcggagaaagagcgcagtactttcttactc
gaagccacaggcagaattgcgcaacttggaggatgggaatttgatgttcaaaaagacact
cttttctggacccaagaggtatttcgcatccatgaattacctgttggtggtgaggtcgaa
gtagacaaagccataaactattacgttgagcatgacagggcaacattacaaagtgcgtta
aatgacgctatagaacacggagcttcatttgacctgactctgcagtttgttactgcaaaa
aacaatcttcgctgggttcgctcagcgggttatccggaaaaacgcgatgatggctcagtt
gtcattcgaggcgcgttccaagatataaccaatctaaaagccgccgaggaaaacgccaaa
gaagccagtcgggccaaaagtgagttcttagccaacatgagtcacgagatacgcacgcct
atcaatggcattatcggtatgaacgacttactgttaaattctcccttaaacgaagagcag
cggcattatgcccaattggcacaaagtagtggaaattcgttgctagtgctgattaatgac
atattggatttttctaaaattgaagccggcaaacttgaaattgaaagtatcgacttcgat
ttacacgatatgctcaacaccttcatagatacctttaccattcgtgccgatgataaaaat
ttacaattagtatttgaaatgcaagattctgtgccccgctggatcaaagctgaccctggc
agaataaggcaagtactgactaacttaactagtaacgctttaaaatttacccatcgtggt
aaggtcgtaattaaagtgaattgcgtggaaaataacaaactgtatttttgtatccaggat
accggaattggtattcctcaagagaaacaaatccatctcttcaaaaaattcaatcaacta
gatacctctaccacccgtaaatttggcggctcaggcttaggtctatccatttctaagcaa
ctggtaaaactaatggaaggtgaaattggcttaaatagcgagtggcacaagggcgctgag
ttttggttttacatacgctatcaaccggctgaacatacccacactccgtcaaacgacatc
tttagtcgcaaagaattggctagtttacgtattttgttggtggatgataatgctgaacag
cgtaaatttctgaactctattcttagcgctagaaatatcgaagtagtagaaaccactagt
gcgcctcaggcgttaaagacacttcgtgagccgctaaataagccgataaacgtagcaatt
ataaatgctgaactcaaaggtattaatggcgctgaactggctaaggctatcaaaaacgat
gaaagattcgcaggggtaaaattaatagtacttgcccccaatggtcaaaaaggtgatgct
aaaaaataccaacaggtaggttttgatgcttactttagtgcgccagttaagccgttagac
ttaatcaactccattgtgctggtgtccaatcgcactagcatccaaagccgctctgttaag
cagtcatttgatttgattactcgtcacaatgcatcccattctgacgcagatatcgcacgc
gttctgctggttgaagacaatccaatcaatcagaccgttgccttcgcgatgctaaaaaat
atggggtgccatgtggagttggcatcgaatggattagaagctatcgagcaactcaataat
gccactaaggctttcgacctcgtcctaatggattgtcaaatgccgattatggatggctac
gaggcaagccgcaaaattcgcgcagcacaacaggctaatttcgatcccaatattcccata
gtggcgctgacagcaaatgccatgaaaggtgatgaagaaaaatgcgtaattgccggtatg
gatggctacctgaccaaacctatcattgctgaagagctgcaaaaaggcttggccaagtgg
ctaaagaaataa
DBGET
integrated database retrieval system
