KEGG   Aliiglaciecola sp. LCG003: QR722_05485
Entry
QR722_05485       CDS       T09143                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
alii  Aliiglaciecola sp. LCG003
Pathway
alii03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:alii00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    QR722_05485 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alii03019]
    QR722_05485 (rnc)
   03009 Ribosome biogenesis [BR:alii03009]
    QR722_05485 (rnc)
   03036 Chromosome and associated proteins [BR:alii03036]
    QR722_05485 (rnc)
Enzymes [BR:alii01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     QR722_05485 (rnc)
Messenger RNA biogenesis [BR:alii03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     QR722_05485 (rnc)
Ribosome biogenesis [BR:alii03009]
 Eukaryotic type
  90S particles
   RNase
    QR722_05485 (rnc)
 Prokaryotic type
  rRNA processing factors
   QR722_05485 (rnc)
Chromosome and associated proteins [BR:alii03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     QR722_05485 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: WJG10493
LinkDB
Position
1300108..1300794
AA seq 228 aa
MIADFKYTALYKRIGYQFKDAANLTLALTHRSFQKQHNERLEYLGDAVLGMIIAEELFKR
FPQQPEGKLTRMRSTLVKGETLAVMGREFELGDVLQLGSGELKSGGFRRSSILADAVEAI
IGAIYLESGYEVCQKLILNWFQSRINDLDPGAHPKDNKTQLQEFLQGRQLPLPEYTVREI
QGKDHDQLFVVECSVTNLADVVLGTGSSRRKAEQQAAKSALEILNDAN
NT seq 687 nt   +upstreamnt  +downstreamnt
atgatcgctgattttaaatatactgctttatacaagcgaattggttatcaattcaaagat
gctgcgaatcttacattagcgctgacgcaccgtagttttcaaaaacaacataatgaacgg
ctcgagtatttgggcgatgcagtacttggaatgattatcgcagaagagttgttcaagcgc
tttccgcaacaacctgaaggtaaactaacgcgcatgcgctcgacgctggtaaaaggcgaa
acgctagcggtaatgggccgagaattcgagttaggtgatgtgctgcaattgggttctggc
gagctcaaaagtggtggattccgtcgcagttcaattttggccgacgcagttgaagctatc
ataggcgcgatttatctagagtccggctatgaagtgtgtcaaaaactcatcttgaattgg
tttcaaagtcgaattaatgatttggatcccggggctcacccgaaagacaataaaactcag
ttgcaagaattcctgcagggtcgacaattacccttaccggaatacaccgtgcgtgaaata
caaggtaaagaccatgatcaattgttcgtggttgaatgttctgtaacaaatttagcggac
gttgtgttgggcactggtagctcgcgacgcaaggctgaacaacaagcagcaaaatctgct
ttggagatactcaatgacgcaaactaa

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