Aliiglaciecola sp. LCG003: QR722_05705
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Entry
QR722_05705 CDS
T09143
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
alii
Aliiglaciecola sp. LCG003
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alii03400
]
QR722_05705 (sbcD)
DNA repair and recombination proteins [BR:
alii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QR722_05705 (sbcD)
Archaeal homologous recombinant proteins
QR722_05705 (sbcD)
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Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WJG10537
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Position
1352084..1353319
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AA seq
411 aa
AA seq
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MKILHTSDWHLGQSFFTKSRKEEHQAFINWLLELVDRQQIDAVIIAGDVFDTGTPPSYAR
EMYNQFVVDLQQLNCVLVVLGGNHDSVSTLNESKQILACLNTFVVASTGVSVEEQVFVIP
DKTGQPSAILCAVPFIRARDVLQSSSGETGLEKRQALGEAIQQHYQTLYQVAITKKQQSG
LDLPIIATGHLTALGVSQSESVRDIYIGSLDGFAADGFPPADYIALGHIHRPQIVAKSEH
IRYCGSPIPLSFDELNTQKQVVLVEFNAAQQRTITPVDVPIFQPMQVLKGGLPALSQALQ
SFKQDQAGLPCWLCIEVETQDYLSDLQQRIQTLTEGLNVEVLQLRRTRNPQRQSLTQIQS
ETLAELTPHDVFEKRLSMERFEGDAEQARRQRIKQQFEQILSRAEHQGEDV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactgcatacctcggattggcatttgggtcagagcttttttactaagagtcgc
aaagaagagcatcaagcctttatcaattggttacttgagctggtagatagacagcaaata
gacgcggtgattattgcaggggacgtgtttgataccggcacaccgcccagctatgctcga
gaaatgtataaccaatttgtggtcgatttacagcaattaaattgtgttctggtggtattg
ggcggtaatcatgactcggtgtcgaccctcaatgagtccaaacaaatacttgcctgctta
aacacctttgtggtggcaagcaccggtgtgtctgttgaggagcaggtgtttgtaatccca
gataaaactggccagccttcagccatactgtgcgccgtgccctttattcgagccagagac
gtattgcaaagcagctctggtgagacagggctggaaaagcgccaagcgctaggggaggca
attcaacagcattatcagactctataccaagttgctataacgaagaaacagcaaagcggc
ttagatttacccatcattgccactgggcatttaactgcattaggtgtaagtcaatccgaa
agcgtcagagatatctatattggcagcttagatggattcgcagcagatggtttcccgcct
gctgattatatcgcgctaggacacattcacagaccacaaatagtcgcaaagtccgaacat
attcggtattgcggctcacctattccattgagctttgatgaactcaatacgcaaaaacag
gtggtgttagtagagtttaacgctgcacagcaaaggacaattacgccagtagatgtaccc
atttttcaacctatgcaagtgctcaagggcggtttgcctgcgctgtctcaggctttgcag
tcatttaaacaggatcaggcaggtttaccttgttggttgtgtatagaggtcgagacccaa
gattatttgtctgatttgcagcaacgtattcaaacccttacagagggattgaatgtagaa
gtcttgcaattacgccgaacacgcaatccacagcgccagtctctgactcaaatacaaagt
gaaacccttgcagagctgacccctcatgatgtatttgaaaaacgcctatcgatggagcgt
tttgaaggtgacgctgagcaagcccgtcgacaacggataaaacagcaattcgagcaaata
ctgtcccgtgcagagcatcaaggggaggatgtatga
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