KEGG   Aliiglaciecola sp. LCG003: QR722_05705
Entry
QR722_05705       CDS       T09143                                 
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
alii  Aliiglaciecola sp. LCG003
Brite
KEGG Orthology (KO) [BR:alii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alii03400]
    QR722_05705 (sbcD)
DNA repair and recombination proteins [BR:alii03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     QR722_05705 (sbcD)
    Archaeal homologous recombinant proteins
     QR722_05705 (sbcD)
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2 FBPase_2
Other DBs
NCBI-ProteinID: WJG10537
LinkDB
Position
1352084..1353319
AA seq 411 aa
MKILHTSDWHLGQSFFTKSRKEEHQAFINWLLELVDRQQIDAVIIAGDVFDTGTPPSYAR
EMYNQFVVDLQQLNCVLVVLGGNHDSVSTLNESKQILACLNTFVVASTGVSVEEQVFVIP
DKTGQPSAILCAVPFIRARDVLQSSSGETGLEKRQALGEAIQQHYQTLYQVAITKKQQSG
LDLPIIATGHLTALGVSQSESVRDIYIGSLDGFAADGFPPADYIALGHIHRPQIVAKSEH
IRYCGSPIPLSFDELNTQKQVVLVEFNAAQQRTITPVDVPIFQPMQVLKGGLPALSQALQ
SFKQDQAGLPCWLCIEVETQDYLSDLQQRIQTLTEGLNVEVLQLRRTRNPQRQSLTQIQS
ETLAELTPHDVFEKRLSMERFEGDAEQARRQRIKQQFEQILSRAEHQGEDV
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaaaatactgcatacctcggattggcatttgggtcagagcttttttactaagagtcgc
aaagaagagcatcaagcctttatcaattggttacttgagctggtagatagacagcaaata
gacgcggtgattattgcaggggacgtgtttgataccggcacaccgcccagctatgctcga
gaaatgtataaccaatttgtggtcgatttacagcaattaaattgtgttctggtggtattg
ggcggtaatcatgactcggtgtcgaccctcaatgagtccaaacaaatacttgcctgctta
aacacctttgtggtggcaagcaccggtgtgtctgttgaggagcaggtgtttgtaatccca
gataaaactggccagccttcagccatactgtgcgccgtgccctttattcgagccagagac
gtattgcaaagcagctctggtgagacagggctggaaaagcgccaagcgctaggggaggca
attcaacagcattatcagactctataccaagttgctataacgaagaaacagcaaagcggc
ttagatttacccatcattgccactgggcatttaactgcattaggtgtaagtcaatccgaa
agcgtcagagatatctatattggcagcttagatggattcgcagcagatggtttcccgcct
gctgattatatcgcgctaggacacattcacagaccacaaatagtcgcaaagtccgaacat
attcggtattgcggctcacctattccattgagctttgatgaactcaatacgcaaaaacag
gtggtgttagtagagtttaacgctgcacagcaaaggacaattacgccagtagatgtaccc
atttttcaacctatgcaagtgctcaagggcggtttgcctgcgctgtctcaggctttgcag
tcatttaaacaggatcaggcaggtttaccttgttggttgtgtatagaggtcgagacccaa
gattatttgtctgatttgcagcaacgtattcaaacccttacagagggattgaatgtagaa
gtcttgcaattacgccgaacacgcaatccacagcgccagtctctgactcaaatacaaagt
gaaacccttgcagagctgacccctcatgatgtatttgaaaaacgcctatcgatggagcgt
tttgaaggtgacgctgagcaagcccgtcgacaacggataaaacagcaattcgagcaaata
ctgtcccgtgcagagcatcaaggggaggatgtatga

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