Aliiglaciecola sp. LCG003: QR722_08445
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Entry
QR722_08445 CDS
T09143
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alii
Aliiglaciecola sp. LCG003
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alii03016
]
QR722_08445 (truB)
Enzymes [BR:
alii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QR722_08445 (truB)
Transfer RNA biogenesis [BR:
alii03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QR722_08445 (truB)
Prokaryotic type
QR722_08445 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Csd3_N
Motif
Other DBs
NCBI-ProteinID:
WJG11040
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All DBs
Position
1965340..1966308
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AA seq
322 aa
AA seq
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MARKRKGRAIDGILLLDKPLGLSSNDALQRVKRVFNAAKAGHTGALDPLATGMLPICLGE
ATKFSQFLLEADKTYSVTAKLGVRTTTSDADGEIVEQRPVESTPEQIEQVCLSFLGNSKQ
VPSMYSALKYQGKPLYSYARQGIEVPREARDITIFSLLIERIVGDEVDMQVHCSKGTYIR
SLVDDIGQILGCGAYVSRLHRSRVTDYPVDRVISLETLFAMRKEIDDAQLDIMDDSSFTE
LDGLLLPMDSAVKTLPSVELEQVCAGYFYNGNPVQCSDALGLATNTQVRVYCGGRFMGVG
FIDDDSRVAPKRTVVRSDKTAG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaaacgtaaaggtagagcgattgacggcattttattgttagacaagccatta
ggtttgtcttccaatgatgcgttacagcgtgtgaagcgtgtttttaatgcagctaaagct
ggacacacgggcgctttagatcccttagccacaggtatgttacccatttgtttaggtgaa
gccaccaagttctctcagtttttgttagaagcggataaaacctactcggttacggccaag
ttaggcgttcgcacaaccacatctgatgcagacggcgaaatcgttgaacaaaggcctgtt
gagtctacacctgagcaaatcgaacaagtgtgtttgtcatttttgggcaactctaaacaa
gtgccatcaatgtactctgcgctaaagtatcaaggaaaaccactttattcctatgctcgt
caaggtattgaagtgccgcgcgaagcccgagatattaccatcttttctttgttgattgag
cggatagttggggacgaagtggacatgcaagtacattgcagtaaaggtacctatattcgc
tcactggtagatgatattggtcaaattcttggttgtggcgcctatgttagtcggttacat
cgtagtcgcgtaacagattatccggtagatagagttatatcactcgaaacccttttcgcc
atgcgtaaagagatagacgatgcacagttagacattatggacgatagcagctttactgaa
ctagacggcttattattacccatggattcggccgtgaaaaccctaccgagtgttgaactg
gagcaggtttgcgctggctatttctataacggaaatccggtacagtgttctgatgcactt
ggcttagcgacaaacactcaagttagagtctattgcggcggacgcttcatgggggtgggt
ttcatcgatgatgacagtcgtgttgcgccgaaaagaaccgttgtgcgtagcgacaaaacc
gcaggttaa
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