Aliiglaciecola sp. LCG003: QR722_10495
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Entry
QR722_10495 CDS
T09143
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alii
Aliiglaciecola sp. LCG003
Pathway
alii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QR722_10495 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alii03019
]
QR722_10495 (pnp)
03016 Transfer RNA biogenesis [BR:
alii03016
]
QR722_10495 (pnp)
Enzymes [BR:
alii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QR722_10495 (pnp)
Messenger RNA biogenesis [BR:
alii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QR722_10495 (pnp)
Transfer RNA biogenesis [BR:
alii03016
]
Prokaryotic type
tRNA degradation factors
QR722_10495 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
S1_2
PQQ
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WJG07796
LinkDB
All DBs
Position
complement(2435575..2437686)
Genome browser
AA seq
703 aa
AA seq
DB search
MTPITKTFQYGQHTVTLETGVIARQATAAVMASMDDTSVLVSVVGKKEVKNDQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPSESETLTARLIDRPIRPLFPDGFMNEVQIIITVVSAN
PEIPTDIISLIGTSAALAISGMPFNGPVGAARVGYKDGGYILNTLNSELETSELDLVVAG
TQSAVLMVESEASVLSEEVMLGAVMFGHEQSQTVVNAISEFASEVGTEKWDWQPVAENTA
LKTKIKELAEAGMTQAYQISDKMERKDAVVAVTEKATAEILAADPEQDAKEVSELLHDLE
SDVVRSRILAGEPRIDGRDPDMIRALHVNTGVLPRTHGSALFTRGETQALVAATLGTERD
AQMIDGLNGKTDSRFMLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIQAVMPSEAEF
PYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSDDNFVVLSDI
LGDEDHLGDMDFKVAGTTEGITALQMDIKIEGITQEIMQKALKQAKEARLHILGVMDQAL
GGHRDEMSEFAPRIYTLKIDQDKIRDVIGKGGAMIRSITEESDTNIEIEDDGTIKIFATE
LAKAEIAIAKIEQVTAEVEAGKTYHGKVTRIVDFGAFVEILPGKEGLVHISQIAHERVNK
TSDYLTEGQMVDVKVMEIDRQNRVRLSIKELLEKPATEAPADE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattactaaaacatttcagtatggtcagcatactgtaactctcgaaacgggc
gttattgctcgtcaagcaactgcagctgtaatggcaagtatggacgatacatcggtatta
gtttctgtagttggtaaaaaggaagttaagaatgatcaagacttcttccctctaacagta
aattaccaagaaaaagcttacgctgcaggtaaaattcctggtggctttttcaagcgtgaa
ggtcgtccttctgaaagtgagacgttaacggcgcgtttaatcgaccgcccaatccgtcca
ttgtttccagatggcttcatgaatgaagttcaaataattattactgtggtctcggctaat
cctgaaatcccaacggatatcatttctttaattggtacctcagcagcattagccatttct
ggcatgccatttaatggtcctgttggcgcagctcgtgtgggctataaagacggtggatac
attcttaatacactaaactctgaacttgaaacaagtgaattggatttagttgttgccggt
acccaaagtgcagtattgatggttgaatctgaagccagcgtattgtctgaagaagtgatg
ttaggtgcggttatgttcggtcacgagcaaagccaaactgttgttaatgctatctcagag
tttgccagtgaagttggtactgagaaatgggattggcagccagttgcagaaaatactgca
ctgaaaacaaaaattaaagagcttgctgaagcgggtatgactcaggcttatcagatttct
gataagatggagcgtaaagacgctgttgttgctgtgactgaaaaagccactgctgaaatc
ttagctgctgatccagagcaagatgctaaagaagtgtccgagttactgcatgacttagaa
agtgacgttgtacgttcacgcatcttagctggcgagccgcgtattgatggtcgtgacccg
gacatgatccgtgcacttcacgtaaatacaggtgtgttaccgcgtacccatggttctgct
ttgttcacccgtggtgaaactcaagctttagttgccgctacattgggtacagagcgtgat
gcacaaatgatagacggtcttaatggtaaaactgatagccgctttatgttgcattacaac
ttccctccatactgtgtaggcgaaactggttttgttggttctcctaagcgtcgtgaaatt
ggtcatggtcgtttagctaaacgtggtattcaagctgttatgccatctgaagctgaattc
ccgtatgtggttcgtgtcgtgtctgaaatcactgaatctaatggttcgtcttcaatggca
tctgtctgtggtacctctttggcgcttatggatgcaggtgttccaatcaaggcttctgtt
gctggtatagcaatgggcttggtgaagagtgatgacaacttcgtagtactttcagatatc
ttgggtgatgaagatcatctaggtgatatggactttaaagtagcgggaacaaccgaaggt
attaccgcacttcaaatggatatcaaaattgaaggtatcacgcaagaaatcatgcagaag
gcgcttaagcaagctaaagaagctcgtttgcatattcttggtgttatggatcaggctctt
ggcggtcaccgtgatgagatgtctgaatttgctccacgtatctacactcttaagattgat
caggacaaaatccgtgatgtaatcggtaaaggtggtgcaatgatccgctcaataactgaa
gaatctgataccaacatcgaaatcgaagacgatggtacgattaagatttttgctactgaa
ttagctaaagctgaaatcgctattgctaagattgagcaagtaacagcagaagttgaagct
ggcaaaacttatcacggtaaagtgactcgtattgttgattttggtgctttcgttgaaatc
ttgcctggtaaagaaggtttggtgcatatttcacaaatcgctcatgagcgtgtgaataaa
acatctgattacttaactgaaggtcaaatggttgacgttaaggtaatggaaattgaccgt
caaaaccgtgttcgtttaagtatcaaagagttgttagaaaaacctgctactgaagcgcct
gctgacgagtaa
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