KEGG   Aliiglaciecola sp. LCG003: QR722_12025
Entry
QR722_12025       CDS       T09143                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
alii  Aliiglaciecola sp. LCG003
Pathway
alii03030  DNA replication
alii03430  Mismatch repair
alii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QR722_12025
   03430 Mismatch repair
    QR722_12025
   03440 Homologous recombination
    QR722_12025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alii03032]
    QR722_12025
   03400 DNA repair and recombination proteins [BR:alii03400]
    QR722_12025
Enzymes [BR:alii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     QR722_12025
DNA replication proteins [BR:alii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     QR722_12025
DNA repair and recombination proteins [BR:alii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     QR722_12025
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: WJG08073
LinkDB
Position
complement(2799215..2799844)
AA seq 209 aa
MPQTRADSLVVLDFETTGLSPDMGDRAIEIGAVRLEKGEVVERFQALMNPGKRISAFIED
YTGITNQMLSQAAPCDEVTDEFASFMGDSNLVAHNASFDKRFLDAELRRVSRAYTGAFAC
SLLVARRLYQQAPNHKLGSLIAYKNIPSDGGFHRALFDSEMTAKLWMTMLQDISQITTRE
DVPFSLIQKLAKTPKIAVYKLLQSGLPKI
NT seq 630 nt   +upstreamnt  +downstreamnt
atgccgcaaactcgcgccgactcccttgtagttctggattttgaaaccacaggactatca
cccgatatgggcgacagggctatcgaaattggtgctgtgcgtcttgaaaagggggaagtg
gttgagcgttttcaggcattgatgaatccaggtaagcgcatcagtgcgttcattgaagat
tataccggtattactaatcagatgttgagccaagcggctccatgtgatgaagtgacggat
gagtttgctagtttcatgggggacagcaaccttgttgcccacaatgcgtcttttgacaaa
cgcttcttagatgccgagttacgtcgagtatccagagcatacacaggtgcctttgcgtgc
tctttactggtggcccgacgtttatatcagcaagcacctaatcataaactcggttcgtta
atcgcctataaaaacatcccatccgatggcggcttccaccgggcgttattcgactcagaa
atgacagcgaaattgtggatgaccatgttgcaagatatttcccaaatcacaactcgagaa
gatgtaccgttttcgctaatccaaaaactggccaaaacacccaaaatagcggtgtataag
ttactgcaatctgggttgcctaaaatctag

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