Aliiglaciecola sp. LCG003: QR722_17190
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Entry
QR722_17190 CDS
T09143
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
alii
Aliiglaciecola sp. LCG003
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alii03016
]
QR722_17190 (truD)
Enzymes [BR:
alii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
QR722_17190 (truD)
Transfer RNA biogenesis [BR:
alii03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QR722_17190 (truD)
Prokaryotic type
QR722_17190 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WJG09042
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Position
3951397..3952443
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AA seq
348 aa
AA seq
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MVELSIDNWGYWQGKPPATGALKAHPEDFVVKEVLGYEPDGQGEHIYLWVEKSGLNTAYV
AEQLAKFCQLPLRAITYAGRKDKHALTQQWFGVHMPGKKGFDWDKLNLAGLIVLEVHRHS
KKLRVGNLKGNRFELTVRDLSSDDQIQQRLETIAQHGVPNYFGPQRFGETRHHSQGGNLA
LAQGMLNGEPVRNRNKRSMAISALRSWLFNQYVEQRRSENKLDQALLGDVCILSGSNSFF
CVQQQDTDIAARLASDDIKLSAPMWGAGELASEQQAKQYELGVAAKYPEVCSALADLGLK
QERRAIVLKPQDLQWQIESNTLKVQFMLPAGCFATSVLREVINTAETS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggttgagctgagtatcgacaactggggttattggcaaggaaaacccccagcaacagga
gcacttaaagctcacccagaagatttcgtggttaaagaagtattgggctatgaacccgat
ggtcaaggggaacatatttatctgtgggtggaaaaaagcggtctcaatactgcgtatgtc
gcagaacagttggccaagttttgccaacttcctttaagagccattacctatgccggacgc
aaagacaaacatgctctgacccagcaatggtttggcgtgcatatgccgggcaaaaaaggg
ttcgattgggacaagttaaatttggctggattaattgtccttgaagtacatcgtcattct
aaaaagctgcgggtcggcaatctcaaaggcaaccgcttcgagttaactgtgcgtgaccta
agtagtgacgaccaaatacaacagcgtctggaaactatcgcacagcatggcgtgcctaat
tacttcggaccccagcgttttggcgagacacgccatcattcacaaggaggaaatcttgcc
cttgcacaaggcatgctcaacggggaacccgtacgtaatcgcaataaacgctcaatggca
atttcagctttgcgctcttggctatttaatcagtatgtcgaacagcgacgcagtgaaaat
aaattagatcaagcattgctaggtgatgtgtgtattttatccggcagtaatagctttttt
tgtgtccagcaacaagacaccgatattgctgcaaggcttgctagcgacgatataaaatta
tcagcgccgatgtggggagctggtgaattggccagtgagcagcaggctaagcaatatgag
ctaggggtagctgctaaataccccgaagtttgtagtgcactagctgatttgggacttaaa
caagagcggcgggccatagtacttaaaccgcaagatttgcaatggcaaattgagtcgaat
acgctaaaggtccaatttatgttacccgcaggatgttttgcaacatccgtattgcgcgaa
gtcattaataccgctgagacgagttaa
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