Aliiglaciecola sp. LCG003: QR722_17295
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Entry
QR722_17295 CDS
T09143
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
alii
Aliiglaciecola sp. LCG003
Pathway
alii00071
Fatty acid degradation
alii00280
Valine, leucine and isoleucine degradation
alii00310
Lysine degradation
alii00362
Benzoate degradation
alii00380
Tryptophan metabolism
alii00410
beta-Alanine metabolism
alii00640
Propanoate metabolism
alii00650
Butanoate metabolism
alii00907
Pinene, camphor and geraniol degradation
alii00930
Caprolactam degradation
alii01100
Metabolic pathways
alii01110
Biosynthesis of secondary metabolites
alii01120
Microbial metabolism in diverse environments
alii01200
Carbon metabolism
alii01212
Fatty acid metabolism
Module
alii_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QR722_17295 (fadB)
00650 Butanoate metabolism
QR722_17295 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QR722_17295 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QR722_17295 (fadB)
00310 Lysine degradation
QR722_17295 (fadB)
00380 Tryptophan metabolism
QR722_17295 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QR722_17295 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QR722_17295 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QR722_17295 (fadB)
00930 Caprolactam degradation
QR722_17295 (fadB)
Enzymes [BR:
alii01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QR722_17295 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QR722_17295 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QR722_17295 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QR722_17295 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WJG09061
LinkDB
All DBs
Position
3970308..3972467
Genome browser
AA seq
719 aa
AA seq
DB search
MIFEGKSLCAKLLDNGIAELVFDAQGSVNKFDQQTVSELEQATQKLAANSNVKGVVVRSA
KSTFIVGADITEFTGLFALADEEVLAWVAKTSQVFDKFEDLPFPTIAAINGFALGGGCEM
TLACDLRVADTNASIGLPEVKLGLMPGFGGTVRLPRLIGADNALEWMTTGRDRKAAKALA
EGAIDSVVAPEHLVDAAIGMLTDAIAGDFDWQARRAQKKAPLTLSPNEATMSFSTAKAMV
AAQAGKHYPAPHIMVDTVAKAAGLDRDAALALENQGFTKLAKSDAAKAQVGIFLADQIVK
SKGKKQAKAATKQIKQTAVLGAGIMGGGIAYQSAVKGTPVIMKDIAQPALDLGLNEAAKI
LGKGMQRGKVDAAKMAATLNNIVPTLEYSAIKDADLVIEAVVENPKVKAIVLKETEQYVA
EDAIICSNTSTISINQLAKSLDKPERFCGMHFFNPVHKMPLVEIIRGENTSEETISAVVA
ATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLILDGADFVAVDKVMEKIFGWPMGPAF
LLDVVGMDTADHASSVMADGIPERMQKIDNDPVTCLYRADRLGQKNGKGFYNFGVDKRGR
PSKTPAPEAYELFAPHCADKRDFDAEEIIARVMVPMANEAIRCLEEGIVASAAEADMALL
YGLGFPPFRGGIFRYIETMGLSNFVALADKYADLGPIYQISDGVREMAASGKSYFSQSA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatatttgaaggcaaaagcctttgtgcaaaattactggacaatggtatagcagaatta
gtgtttgatgcacaaggttcggtgaataaatttgaccagcagaccgtttctgaacttgaa
caagcaactcaaaaacttgctgctaacagcaacgttaaaggtgtggtagttcgctccgcg
aaatctacttttatagtaggcgctgacattaccgaatttaccggtttatttgcattagca
gatgaagaagtcttggcttgggttgctaaaacgtctcaggtttttgataaatttgaagat
ctgccatttccgactatcgctgcaataaacggtttcgcattaggtggcggttgtgaaatg
accctagcctgtgatttacgtgttgcagacaccaatgccagcatcggcttgccagaagtt
aaattaggtttaatgccaggatttggcggtacagtaagactaccacgactgattggtgct
gataacgcattagaatggatgactaccggacgtgatcgcaaagcggccaaagccctagct
gaaggtgcaattgacagcgtggtagccccagaacatttagtcgacgcagccatcggcatg
ctaaccgatgctattgctggcgattttgattggcaagctcgccgggcacagaaaaaagcg
ccgctaacccttagcccgaatgaagccactatgagtttctccacagctaaggcgatggtc
gccgcgcaagctggaaaacattaccctgccccgcatatcatggtcgatacagtagcgaaa
gcggctggattagatcgtgacgctgcccttgcacttgagaatcaaggttttaccaaacta
gccaaatctgatgctgctaaagcccaagttggaatattcttagccgatcaaattgttaag
agtaaaggtaaaaaacaggctaaagctgcaaccaagcaaattaagcaaactgcagtgtta
ggcgcgggtatcatgggtggtggcatcgcataccagtctgccgttaaaggcacccccgtt
atcatgaaagatatcgcccaacctgcattggacttaggcctaaatgaggctgcgaaaatc
cttggtaaaggtatgcaacgtggcaaggtagatgccgccaagatggctgctactcttaac
aatattgtgcctacgctagaatattctgccatcaaagatgctgacttagtcatcgaagcg
gttgtggaaaaccctaaggttaaagcaattgtattgaaagagactgagcaatatgtggca
gaagacgccattatttgttccaacacctcaactatctctattaaccagttagcaaaaagt
ttggataaacccgaacgcttctgcggcatgcatttcttcaaccctgtgcataagatgcct
ttggttgaaatcattcgtggtgaaaacacctcagaagaaactatttctgcagttgttgct
gcgactttgaaaatgggtaaaacccctatcgtagtaaacgactgcccaggcttcttagtt
aaccgtgtgctctttccttacttcgctggattcagcaagctaatccttgatggtgccgat
tttgtagccgttgacaaggttatggagaaaattttcggctggccgatgggacccgcattc
ttactcgatgtagtgggaatggatacagctgatcacgcatctagcgtgatggccgatggt
attcctgagcgcatgcaaaagattgataatgatccggtaacttgcttatatcgtgcagat
cgtcttggtcagaaaaatggcaaaggtttctataactttggcgtcgacaaacgcggacgt
cccagcaaaactcctgcgccagaagcttacgaattatttgcaccgcactgtgccgataaa
cgtgacttcgatgccgaagaaattattgcgcgagtgatggtacctatggcgaacgaagcc
atccgttgtttagaagagggcattgttgctagtgctgcagaagccgatatggcattgctt
tatggtcttgggttccctccctttagaggcggtatattccgttatatcgagacaatgggt
ttgagcaatttcgtcgcattagctgacaaatatgctgatttgggtccgatttatcagatt
tctgatggcgtgcgcgagatggccgcttcaggtaaatcttatttttcacaatccgcttaa
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