Aliiglaciecola sp. LCG003: QR722_17660
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Entry
QR722_17660 CDS
T09143
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
alii
Aliiglaciecola sp. LCG003
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alii03021
]
QR722_17660 (rpoH)
Transcription machinery [BR:
alii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QR722_17660 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
IF2_N
HTH_3
HTH_25
UCR_14kD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WJG09131
LinkDB
All DBs
Position
complement(4046330..4047184)
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AA seq
284 aa
AA seq
DB search
MSTNMRALALSVPQSGSIETYIQAVSTINMLTVEEERALAERLQQDDDLEAARKLVMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKNKKRLGWFTHDEVQKVAKELGVSTKEVLQMEARMSSQ
DQAFDLSADDDESGSFAPVQFLEDKSADVESEVLDADYDKNASKRLYSAIKTLDERSQHI
IQTRWLTDDKLTLQELADKYQVSAERVRQIEKNAMKKLQSAMVA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaatatgcgagctttagcattgagcgtccctcaaagtggaagcatcgaaacc
tatattcaagcggtcagcactattaatatgctgacggttgaagaggagcgtgcgcttgcc
gagcgtcttcagcaagatgatgacttagaagctgcacgtaaactggttatgtctcactta
cgttttgttgtccatatagctaaatcttattctggctatggattgccacaagcggattta
attcaagaaggtaatatcggtttgatgaaagcggttaaacgttttgatccaacagttggt
gttcgcctagtctcctttgctgtgcattggattaaagccgaaattcatgaatttgtctta
aaaaattggcgcatagtgaaagttgcaaccactaaagcccaacgtaagttatttttcaat
ctacgtaagaataagaagcgtttaggttggtttacccacgatgaagtgcaaaaagttgca
aaagaactgggtgtgagtaccaaagaagtactgcaaatggaagctcgtatgagtagccaa
gatcaggcttttgacctatcagctgatgatgatgaaagtggaagctttgctcccgtccaa
tttttggaagacaaatctgccgatgttgaaagcgaagtattggatgccgactatgataaa
aacgctagtaagcgtttatactcggcgatcaaaaccttagacgagcgcagccaacatatt
attcaaacccgttggttgactgacgataaacttactttgcaagaacttgctgataaatac
caagtgtcagctgagcgagttcgtcaaattgaaaagaatgcaatgaagaaattacagtca
gcgatggttgcttaa
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