Actinomyces lilanjuaniae: D5R93_08480
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Entry
D5R93_08480 CDS
T09845
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
alil
Actinomyces lilanjuaniae
Pathway
alil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5R93_08480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alil03400
]
D5R93_08480
DNA repair and recombination proteins [BR:
alil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5R93_08480
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D5R93_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
SMC_N
DnaJ_CXXCXGXG
AAA_29
Anti-TRAP
AAA_25
ATPase
AAA_16
Zn_ribbon_8
AAA_23
AAA_22
RNase_E_G_Thio
DUF463
HUTI_composite_bact
zf-C2HE
Motif
Other DBs
NCBI-ProteinID:
AYD90037
LinkDB
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Position
1984298..1986829
Genome browser
AA seq
843 aa
AA seq
DB search
MTARSVAPPAITVRGARVHNLKDVTVEVPLGRLVAVAGVSGSGKSSLALGVLYAEGARRY
LESLSTYTRRRLTQATRPAVDEVLHVPAALALHQRPPVPGVRSTFGTSTEVLSSLRLVYS
RLGHHTCPQGHVNEPTTNVALERPLRCTTCGTQFSPPSAESFAFNSEGACPRCEGTGVVR
TVDESTLVPDDSLTIDEGAVAPWQNLMWSLMKDIVREMDVRTDVPFRELTARERDIVLHG
PAEKRHILYVNDKTGVAAEMDFTYYSAVHTVENALAKVKDERGMRRVEKFLHEASCPDCG
GSRLSELARSTMVRGISLDQACVMPLGDLVEWAAGIPGTMPDDLTAMARQIVDELTVTAT
RLLDLGLGYLSLDRASSTLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPANVAGLL
AVMRDLLADGNSVLVVDHDAALLAQADWLLEIGPGSGAQGGQVVICAPLEQALADPASQV
AGFLTGTEDVLVRDTAAPEEVFDHGRVRLETAPVHTVRALDVELPEQRLTAVTGVSGSGK
TTLVLEALVPALASLAGDEPLPRPATSIETGGTRRVVVVDSTPIGANVRSTVATYSGVLD
SLRRTWAALPQARQAGLKAGDFSYNTGSLRCPTCDGTGQVVLDVQFLPDVEIVCPACEGS
RYRVQALEYRRVRRGGSQAEATSLPSLLAMTVEQACEAVSDLPSARRRLELLVELGLGYL
RLGEATTTLSGGEAQRLKLAEDLGRDQHGTLFVLDEPSIGLHPLDVRVLLGVLDRLIEQG
ASVVVIEHDLDMIANADWIIDMGPGGGQDGGRVVATGTPAQVAAAPASVTGRYLARHLGR
RRA
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccggtctgtggcccctcccgcaatcaccgtgcgtggcgcccgcgtccacaac
ctcaaggacgtcaccgtggaggtacccctggggcgactggtcgccgtggctggcgtgtcc
ggctcgggcaagtcctccctggccctaggagtcctctacgccgagggcgcccgccgctat
ctggagtccctgtccacctacacgcgacggcgcctgacccaggcgacccgccccgccgtc
gacgaggtgcttcacgtccctgctgccctggccctgcaccagcgcccacccgtgcccggg
gtgcgctcgaccttcggcacctcaaccgaggtgctcagctcgctgcgcctggtctactcc
cggctaggccaccacacgtgcccgcagggccacgtcaacgagccgaccactaacgtcgcc
ctcgagcgccccctgcgctgcaccacgtgcggcacccagttctccccgccgagtgcggag
tccttcgccttcaactctgagggtgcctgcccccggtgcgagggcacgggcgtggtacgc
acagtggacgagtccaccctggtgcccgacgactccctgaccattgacgagggcgccgtc
gccccctggcagaacctgatgtggtcacttatgaaggacatcgtccgtgagatggacgtg
cgcacggacgtgccgttccgcgagctgacggcccgggagcgggacatcgtgctccacggc
cccgccgagaagaggcacatcctctacgtcaacgacaagaccggcgtggccgccgagatg
gacttcacctactacagcgcggtacacaccgtggagaacgcgctggccaaggtgaaggac
gaacggggcatgaggcgggtggagaagttcctccacgaggcgagctgcccggactgcggc
ggctcccgcctgtctgagctggcgcgctccacaatggtgcgcggcatcagcctggaccag
gcctgcgtcatgcccctgggcgacctggtggagtgggcggcgggaattccggggaccatg
ccggacgacctgaccgccatggctcgccagatcgtcgacgagctgacggtgaccgccacc
aggctgctcgacctgggactgggctacctcagcctggaccgggcctcctcgacgctgtcc
accggtgagcgccagcgcgtccagctggcccgagcggtacgcaaccgcaccaccggggtc
ctctacgtgctcgacgagccgagcatcggcctgcacccggccaacgtcgcgggcctcctg
gccgtcatgcgcgacctcctggccgacgggaactcggtgcttgttgtcgaccacgacgcc
gccttgctggcacaggccgactggctcctcgagatcggccccggatcgggcgcgcagggc
ggccaggtggtgatctgcgccccgctggagcaggccctggccgaccctgcctcccaggtg
gccgggttcctcaccggcaccgaggacgtcctggtacgtgacaccgccgcacccgaggag
gtcttcgaccacggcagggtccgtctggagaccgccccggtccacacggtgcgcgccctt
gacgtggagctgcccgagcagcggctgaccgcggtgaccggggtctcgggctcgggcaag
acgaccctggtgctggaggcactggtgcccgccctggcctccctggcgggagacgagccg
ctgccccgcccagccacgagcatcgagaccggaggaacgcgccgcgtcgtggtggtggat
tccacaccgatcggcgccaacgtgcgctctaccgtcgccacctactccggggtgcttgac
tccttgcgccgcacctgggcggccttgccccaggcccggcaggccgggttgaaggcgggg
gacttctcctacaacaccgggtccctgcgatgccccacctgcgacgggaccggccaggtg
gtcctcgacgtacagttcctgcctgacgtggagatcgtctgccctgcctgcgagggcagc
cgctaccgggtgcaggccctggagtaccgccgggtcagacgcggcggcagccaggcagag
gcgacatccctgcccagtctgctggccatgacggtggagcaggcctgtgaggcggtcagc
gacctgcctagcgcccggcggcgcctggagctgctggtcgagctgggactgggctacctg
cgcctgggcgaggctacgacgacactgtcaggcggggaggctcagcgtctcaagctcgcc
gaggacctgggacgcgaccagcacgggacgctgttcgtcctggacgagccgagcatcggg
ctgcacccgctggacgtgcgcgtgctgctgggggtgctggacaggctgatcgagcagggg
gcgagcgtcgttgtcattgagcacgacctggacatgatcgccaacgccgactggatcatc
gacatgggaccgggaggtggccaggacggcggccgcgtggtcgccacgggcacacccgcc
caggtcgccgccgccccggcctcggtgacaggccgctacctggccaggcacctggggaga
cggagagcgtag
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